Physcomitrium patens (spreading earthmoss): 112275165
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Entry
112275165 CDS
T01041
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80-like
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
112275165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112275165
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
112275165
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
112275165
NCBI-ProteinID:
XP_024361040
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All DBs
Position
22:7032225..7037710
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AA seq
715 aa
AA seq
DB search
MARSKETLMLLLDVGPSMHPYLADVSKCMTTLIHRKLMLSKNDEVGVVYFGTTETDNELN
KEMEGYHNIVVVEPIAVVSQDLAHRLENIPCGFGSSDFLDVIVVGCDMLMKKLGENKKGN
KRLCLVTDAASPVREPSEGTVEDQVRNIAERMGEQGIKLDVVVVRVGQNFLINSTGQHQN
DVLLDLFKLHTQAEIGIARTATSMLGIIRPRAVSPTTLYRGDFELTPDLRIKVWVYKKTS
QEKLPTLKKYSNEAPASDSHATREVKIDTEYKSSDNPDVSVPPEQRTKAYKYGKNFIPIS
SSMEDSLKFKPEKGVKLKGFVKRSDIPRHYFLKESSIFLPEPGHQKSIVAVSALARAMKE
HDYAAVVRCVWRQGQTNVVMGILLPFVSAQENVADGFYFNVIPFLDDMREFRFTSFSSMP
ESLQPSCEQQEAAYNLVRMLDLSPSEDEELLQPEQTINPVLQRFYYFLHLRSLNPEAKVP
PLDESLRCIVEPDLLRLDENQYAINQFSQQLTLTPNIQENGKKSFWKGERRDGNVLQIKD
EPAFMDVDMKNPGSVSFNSLASRKVEEIGSANPVADFEALMARRDSPEWVGKAIQGMKKM
IYDLLDSAYNGNTYEKALACLISLRLGCVIQEEPLEFNFFLRDLKTKGSTIRLQDFWQQV
MGKKITLISKDEAPDSNVGAAEAASFLTSEKLIAKKEEPADEIDEMEALLGGAMS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagcaaggaaacgttgatgctgttgctggatgtgggtcctagtatgcaccct
tatctggccgatgtatcaaagtgcatgactactttaatacacaggaagctcatgctgagt
aagaatgatgaggttggagtggtttattttggcacaactgaaacggacaacgagctgaac
aaggaaatggaaggttatcataatattgtggttgtagagccaattgctgttgtatctcaa
gatctagcacatcgattggaaaacattccatgcggatttggttcaagcgactttttggat
gtcatcgttgtgggttgtgacatgttaatgaaaaaactgggtgaaaacaagaagggcaat
aaacgcctgtgtcttgttactgatgctgcatccccagttagagaaccttccgaaggaact
gtagaagatcaagtgagaaatatagcagaacgtatgggtgaacaaggtatcaagttagat
gttgttgtagtccgtgttggtcaaaactttttgataaactctactgggcaacatcagaac
gacgtccttttagatctcttcaaattgcacactcaagcggagattggtattgcacgaact
gcaacatctatgctgggaattataaggcctcgcgctgtttcacctacaactttatatcgc
ggcgactttgaacttacaccagatctacgcattaaggtatgggtgtacaaaaagacttcg
caggagaaacttcctacattgaaaaagtattccaatgaagcacccgcctccgactctcat
gcaacccgtgaagtgaagatagatactgaatacaaaagctctgacaacccagatgtttct
gttccccctgagcaacgaaccaaagcatacaagtatggaaagaatttcatccctatttct
agttcaatggaggattctctgaagttcaaacctgaaaaaggcgtcaagcttaaggggttt
gttaaacgttctgatattcctcggcattacttccttaaggagtctagcatatttttgccg
gagcctggacatcaaaagtctattgtagcagtgtcagcacttgctcgagccatgaaagaa
catgattacgcggcagtagttcgttgtgtgtggagacaaggacaaaccaatgttgtcatg
gggatccttttaccatttgtttctgcacaagaaaacgtggctgatggtttttacttcaat
gtcatacccttcctggacgatatgcgggagttccgtttcacgtcttttagctctatgcca
gagtctttgcagccaagttgtgaacagcaagaagctgcatataatctggttcgtatgctc
gacctgtctccaagcgaagacgaagaactgcttcagccagaacaaaccattaatcccgtt
ctgcagagattctattattttttgcatttgcgatccctcaatccggaggccaaagtacct
ccactagatgaatccttgcgctgtatagtagaaccagatctgctgcgtcttgatgaaaat
caatatgcaataaatcagttctctcaacagttaacactgacgccaaatatccaggagaat
ggcaagaagtctttctggaaaggcgaacggagggatggtaacgttctgcaaatcaaagat
gaaccagctttcatggatgtggatatgaaaaaccctggttctgtatctttcaatagtctt
gcttcaaggaaggttgaggaaattgggagtgcaaatcctgtggctgattttgaggcactc
atggctcgccgtgacagccctgaatgggttggcaaagcgattcaagggatgaagaaaatg
atatatgatctcctagactctgcttacaatggcaacacatacgaaaaggctcttgcatgc
ttgatttccctgcgattggggtgtgtaatccaagaggaacctttggaattcaattttttc
ctacgcgatttaaagactaagggaagtacgatacggctgcaagacttttggcagcaagtc
atgggcaaaaaaattactctaatttccaaggatgaagcacctgacagtaatgtaggagct
gctgaagctgcatcatttttaaccagtgagaagctgatcgcgaagaaggaagaaccggct
gatgagattgacgaaatggaagctcttcttggaggagctatgtcataa
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