Physcomitrium patens (spreading earthmoss): 112280417
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Entry
112280417 CDS
T01041
Name
(RefSeq) lycopene beta cyclase, chloroplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00906
Carotenoid biosynthesis
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
Module
ppp_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
112280417
Enzymes [BR:
ppp01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
112280417
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GFIT
Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
Thi4
NAD_binding_9
FAD_binding_2
NAD_binding_8
FAD_binding_3
Trp_halogenase
HI0933_like
Pyr_redox_3
Pyr_redox
2-Hacid_dh_C
FAD_oxidored
XdhC_C
TrkA_N
Motif
Other DBs
NCBI-GeneID:
112280417
NCBI-ProteinID:
XP_024371653
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Position
3:21107086..21111346
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AA seq
559 aa
AA seq
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MVMAMAELGSALSRSSFAVSSFAPSSSSQKAAADVLCNELISSRDFLTGAVIPCKPGRFQ
LHTKRGQRQLPVCRASSLLELVPPHVKKNLNYELLRFDTLKRKAVDLVVVGAGPAGLAVA
QRVSGEGVDVCVVDPAPQSVWPNNYGVWVDEFEDLDLLDCLDYTWGSAVVYLDDARKKTL
ERPYGRVNRTRLKSKMLEACIANGVQFHQAKVKDVDHNVSKSIVTCEDGTMIEAAVVLDA
TGHSRRLVQYDKPFNPGYQIAYGIVAEVDSHPFDVDKMLFMDWRDSHLHGDKLLMDGNLE
LPTFLYAMPFSANHIFLEETSLVARPGVPMDVIQKRMELRLKHLGIHVRSIEEDEKCVIP
MGGVLPVIPQRVLGIGGTAGMVHPSTGYMVARTLAAAPLLAESVIKSLGGSTSTHVSSRP
QYSQKVESSTYSQGLEATSDEDNAGPSGDELAAGVWADLWPLERQQQRAFFCFGMEVLLK
LDLAGTRRFFDAFFDLEAHLWQGFLSSRLYFIELIGFGLSLFKHATNHARAEIVASGTVP
LAKLILEVAQMRPPKDQSK
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggctatggcggagctgggttcagcactttcgaggtctagtttcgcagtgtct
tccttcgctccgtcgtcttcatcccagaaggctgcagctgatgtcctctgcaacgaactc
atctcttcccgggactttttaacaggggctgtgataccttgtaagccaggaaggtttcag
ctgcacacgaagcgagggcagcgacagttgcccgtatgcagggcaagttctcttctcgag
cttgtgccccctcatgtgaaaaagaacctgaattatgaacttctcaggtttgacactttg
aaaagaaaggcagtggacctggtggtggtgggtgcaggaccagctggcttggctgtcgcc
cagcgagtttctggggagggtgtggatgtgtgtgttgtcgaccccgccccacaaagcgta
tggcccaacaactacggtgtgtgggtagatgagtttgaggacctagatcttttggattgc
ttggattacacctgggggagcgctgttgtgtatctggacgacgctagaaagaagactttg
gagagaccatatggccgcgttaatcgtactcggttgaaatctaaaatgcttgaagcttgc
attgcgaatggcgtacaatttcaccaggctaaggttaaggatgtggaccacaatgtatcg
aagtcgattgtcacctgcgaagatggcaccatgatcgaagcagctgttgtgcttgatgct
acaggccattcaagacggctagtacagtatgataagccattcaatccaggctatcaaatt
gcttacggaattgttgcggaagtagatagtcatcctttcgacgtcgacaagatgctattc
atggactggcgagattcccatttgcacggggacaaactgcttatggacgggaacttggag
ttaccgactttcctgtatgcgatgccattttcagccaaccacatatttctagaggaaaca
tcattggtggcacggccaggcgtaccaatggatgtcattcaaaaacgcatggagttgcga
ctcaaacacttaggcatccatgttcgtagcattgaggaagatgagaaatgcgttattcca
atgggtggtgtgttgcctgtcatcccacaaagagtgcttggtattggtggaaccgcaggc
atggttcatccatcaactggttatatggttgcgaggacactagctgcagcacccctgttg
gcagagtctgttataaagagcttggggggttccacaagcacccatgtttccagtagaccg
caatattcccagaaggttgaatcctcaacttattcacaaggacttgaagcaacatctgat
gaagacaatgctgggccatcaggggatgaactggcagctggtgtgtgggcggacttgtgg
cctttggaacggcaacaacaacgagcttttttctgttttggcatggaggttctcctcaag
ctggacttggcgggtacacgacgcttttttgatgcttttttcgatcttgaagcccacctc
tggcaagggttcctgtcttcacgtctttatttcattgagctaattggatttgggctctcc
cttttcaaacatgcgactaatcatgcgagggcagagattgtggcaagtggaactgtaccg
ctggctaaattgattttggaagttgctcagatgagacctccaaaagatcagtcaaagtga
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