Physcomitrium patens (spreading earthmoss): 112285106
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Entry
112285106 CDS
T01041
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112285106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112285106
Membrane trafficking [BR:
ppp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112285106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Wtap
Motif
Other DBs
NCBI-GeneID:
112285106
NCBI-ProteinID:
XP_024381409
LinkDB
All DBs
Position
1:13477467..13485170
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AA seq
1074 aa
AA seq
DB search
MQQQGGNPGSPRFPNSPNNPNARPQFSPFSAPGSVPRAGPPTWQGGASGPQFRLHVPGQP
PGPPGAPKTLADQLQNPISPLPVGPPSAYRPEGPPAGYQPYNPTPLVSGPLPPPFARPPP
PGGPPMAGPPVTIPTPSFSPPNLASMGASGQANSVGSPRFGPSGSVRAPLQGAGYGPPAR
FPMNPGPPPPSGVFPPPPGSRPSFSNPSQAPSPLGPQFGSPSSQPVSTGQQYNVMPQSPK
SASTIPQPPQFSSMNPPQYGAPLSSQNFYGGPPPPPTAGHYGDGQVGAYSHPPPASSYGG
NYHQVQGLVEDFQSLALVPVHGSPDSTVDPATLPRPLDGAEEVKPSGNLNCNPRYLRLTI
NAMPNAHSLMSRWHLPLGAVTHPLAEAPPGEEVPVVNFAGTIVRCRRCRTYINAYVMFTD
GGRRWRCNVCSLLNEVPVDYFCPLDENGRRRDAGERPELSCGSVEFVAPTEYMVRPPMPP
VYFFLIDVSLSAINSGMVMVAAATIKASLDKLLGFPRTQIGFMTFDSTLHFYNLKSSLTQ
PQMMVVADLDDPFLPLPDDLLVNLSESRSVVDTLLDSLPSMFENNVNIESALGPALKATF
MVMSQLGGKLLLFQSTLPSLGLGRLKLRGDNPRIYGTDKEHLLRGTEEQFYKQMAADFSK
YQIAVNIYAFGERYTDIASLGVLAKYTGGQVCYYPAFLALLHGEKFSYDLARDLSRETAW
EAVMRIRCGKGIRFSSFHGHFMLRSSDLMALPAVDCDKAFAMQLQLEDTLLSTQTVYFQV
ALLYTSSTGERRIRVHTMATPVVNELSELYKAADVGAIASLMSRLAVEKTLQTKLEDSRQ
ACQMRLVRSLQEYRKLFSVQHRTSNRLIYPESLKLLPLYTLAIIKNMALRGGFGDCSPDQ
RSAMGFQIMTMSIPRLLRLLYPSLIRLDEYLLQDSRGDGPAGLPAPLVLSSEQLDPRGAF
LLNDGLSFILWLGKVLPAEFVKDLLGPEAAYTTDSTKIALVEQESVISKRLMSSLQALRQ
SCPAVYQLCTAVRQGEQPLEGTLVLSNLLEDRSSGATGYADFVAQIYRQVSQKI
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaaggggggaacccgggttcgcctcggtttcctaacagccctaataatccc
aatgctcgaccgcaattttcacctttttcagctcctggttcagtaccaagagctggaccg
ccaacatggcaaggtggcgcctctggccctcagtttcgactgcatgttccaggtcaacct
cctggaccccctggagcaccgaaaaccctggcagatcaacttcagaatcccatatctcct
ctgccagtaggacctccttcagcttatcgcccggaaggtcctcctgcaggttatcaacca
tacaatcctacacctctcgtctctggtccattgcctccaccctttgccaggcctccgccc
cccggaggtccgcccatggcaggtcctcccgtcaccattccaaccccttctttttctcca
ccaaatttagcttccatgggagcatctgggcaagcaaattctgtggggagtcctcggttt
ggaccgagtggtagcgtaagagcaccccttcagggagcagggtatggtcctccagcaaga
ttcccaatgaatcctgggcctccaccaccttctggagtgttccctccccctccaggcagc
aggccatcgtttagcaatccctcacaggctccttcacccctgggtcctcagtttggatcg
ccatcatcgcagccagtgtcaacagggcaacagtataatgtcatgccacagtcaccgaag
tctgcgtcaactatcccccaacctccccagttttcttcaatgaatcctcctcaatatgga
gcccctctctcgtcacaaaatttttacggtgggccgcctcctccaccgacggcagggcac
tatggtgatggccaagtgggcgcgtacagccacccaccgccagcaagctcttatggtgga
aattaccatcaagtgcaaggtttggtcgaagatttccaatctcttgctttggttcctgta
catggatcacctgacagcactgtagatccagccacacttccaaggccgcttgacggtgcg
gaggaagtgaagccaagtggaaatttaaactgtaatcctcgatacttacgtcttacaatc
aatgctatgccaaatgctcattctttaatgtctcggtggcatctgcctcttggagctgtt
actcatcctcttgcagaggcaccacccggggaggaggttcctgtggtgaattttgcaggt
acgatagtaaggtgtcgacggtgtcgtacgtacatcaatgcttatgtgatgtttacagac
ggagggcgccggtggcgttgcaatgtgtgttcactactaaatgaagttcctgtggattac
ttttgtcctctggatgagaacggacggcgtcgagatgccggcgaaaggccggagctttcc
tgtggtagtgtggagtttgtggctccaaccgagtacatggttcggccaccaatgccgccc
gtgtacttctttctcattgatgtctccctttcagcaataaactctgggatggtcatggtt
gctgcagcgactatcaaagcatcattggacaaactattaggatttcctaggactcagata
ggatttatgaccttcgacagcactctgcacttctacaatctcaagtcctccttgacacaa
ccgcaaatgatggtagttgcggaccttgatgatccatttctaccacttccggacgatttg
ctggtgaacctgtcggagtctaggagtgttgtggacactctgcttgatagcctgccttca
atgtttgaaaataatgttaacatcgagtcggctcttgggcctgcactgaaagcgactttc
atggtcatgagccagctgggagggaagttgctacttttccagagtactttgccctctctt
ggtctgggaaggctgaagcttcgaggcgacaaccctcgcatctatggaacggataaagag
caccttcttcgtggcacagaagagcagttctataaacaaatggctgctgatttttcgaag
tatcagatcgctgttaacatatatgctttcggtgaacgttacactgatatagcttctttg
ggtgtattagctaagtatacaggaggacaggtttgttattatcctgcattccttgccctg
ctgcatggcgagaaattcagctatgaccttgctcgagatctttcaagagaaaccgcttgg
gaggctgtcatgagaatacggtgtggaaaaggaatacgcttctcatcatttcacggccac
ttcatgctacgcagttcggaccttatggctcttcctgctgtggactgtgacaaggctttt
gctatgcagctccagctggaagacactttgttgtccacgcagacggtctacttccaagtc
gccctgctttatacctcttcaacaggggagcgtcggatacgagtgcacactatggctact
cctgtggtgaacgagctgtcagagttgtataaagcagctgatgtaggcgctattgctagt
ttgatgagtaggcttgctgttgagaagacgctgcaaacaaaacttgaagattctcgtcaa
gcttgtcaaatgcggttggttcgaagcttgcaggagtaccgtaagttgttttcagttcaa
catcggacaagcaataggttgatttaccccgagagtttgaagctgcttcctctttacact
cttgctataattaaaaatatggcacttcgaggtggctttggagattgctcacctgatcaa
aggtctgcaatgggatttcaaatcatgacaatgtccataccaagactgctgaggttgctg
tacccgtcactcatccgtcttgatgagtaccttttgcaggactcgagaggtgatggtcct
gcgggattgcctgctcctttggttctttcttcagaacagcttgacccgcgcggagcattt
ttattaaatgatgggttatcatttattttgtggttaggaaaggttctgcctgctgaattt
gtgaaagatctgctcggacctgaggctgcatatactactgattccaccaagattgcacta
gtcgaacaggagagtgtaatctcgaaacggttgatgtcctctctgcaagcactccggcaa
agttgtccggctgtatatcaactttgcacagcagtgagacaaggggagcaaccactggaa
ggaactcttgtgctttcaaatttacttgaggaccgatcttcgggggccaccggatatgcc
gactttgttgcccagatttatcgccaggtttcgcagaaaatttag
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