Physcomitrium patens (spreading earthmoss): 112286319
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Entry
112286319 CDS
T01041
Name
(RefSeq) protein GLE1-like
KO
K18723
nucleoporin GLE1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112286319
03015 mRNA surveillance pathway
112286319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112286319
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112286319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
112286319
NCBI-ProteinID:
XP_024383848
LinkDB
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Position
9:complement(14422265..14426976)
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AA seq
681 aa
AA seq
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MFSSSGSPNGLSSHRSPPYASRATPAPESPGVSPGVSPGGRLQLILKSPYKSKVVSVVEK
FVDPSPDWTLQDLQSELDVISTRYTSTVALDNEPPPSTAKGISWRELSVTADFGRTNAPF
RMRAFDSDSETESSDDELNSPAPASSNRVNGVGVGKDDHIRHANSKGSEELLVVVKDDVR
ESSPLLARTGYVESALLELERERHSRVQEEFRKRRLLLDNALREEVQREAALLARVEKEK
EAKCELARRSDKQDQRQIAELRDEHLSALQRDHELRSQFEARQIRKEAAEEEARRQEIAA
REERERQAKAKIQLAKEKAEAEAAKRKAQADAAAAAALKREEDQKAKENLQQSAKEKDAH
KENADQKESTSKATTGLKPKVAPSAAKLEESRLINLRAYEAVYAPLRTNPVQQKELKTYE
RQIIKHLQQIAATQQQVGIKSRDLLQFLNSSMGVPTQFLLVTLGAKLLSQCESQILKLPS
FAFALAQVIVNVASQVPLLIDIVLAKLHEVCIFTVPKYYVFTKDQFENDAAYYKALGYRE
EDGKLESTDDYVARQAAYMTFYGAMIQTDVAGGKNPHGLAAGWAWVARFLNSIPADRNTA
SALEAFLKMAGFRLYQVYPKPFMRIMQAIVTEYIENLKKTGDGDARAVVSRLETFLHLQK
YLQEPEGRKMPVTDVSSSLKA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttttcctcgtccggttctcctaatggcttgtcatcacatcggtcgcctccttatgct
tccagagcaacaccagctccagagagtcccggagtgagccctggcgtcagtcctggaggt
cgtttgcagcttattctcaagagtccctacaaatctaaagttgtgtctgtcgttgaaaaa
ttcgtggatcctagtccggattggactttgcaggatttgcaatcggagctggatgtgatt
tccactcgctacacttctactgtggctttagacaatgagcctcctccttcgactgcaaaa
gggatatcgtggcgagaattgtctgttacagctgattttggcagaacaaatgcgccattt
aggatgcgagcatttgacagtgattctgagactgagtccagtgacgatgagctcaattct
cctgcgccagcttcatccaaccgcgtcaatggtgtaggcgttggaaaggatgatcatatt
cggcacgctaattcgaagggttcggaagaattgcttgtagtagtcaaggatgacgtgcgg
gagagtagtccacttcttgcacgaactggatatgtggaatccgctctcttagagctggaa
cgagaacgccatagtagggtacaggaggaatttcgaaagaggcggctgcttcttgataat
gccttgagagaggaagtgcaaagagaggcagccttacttgcgcgtgttgagaaagaaaaa
gaagccaagtgtgagttggcaaggcgctcggataaacaagatcaaagacaaattgctgag
ctacgagatgaacatctatccgcccttcaaagggatcacgaacttcggtcacaatttgaa
gctcgccagatcagaaaagaagctgccgaagaagaagctcgtcggcaagaaatcgccgct
cgagaagagagagaacgacaagctaaagctaaaattcagctagcaaaagagaaggctgaa
gctgaagcggccaagaggaaggctcaagcagatgctgcagcagcggcggctttaaagcgt
gaagaggatcagaaagcaaaggaaaatttgcagcagagtgcaaaggagaaggatgctcac
aaggaaaatgctgatcagaaggagtctacttcgaaagcaaccacaggattgaagccgaaa
gtggcaccttctgcagccaaattagaggagtctcgattaatcaatctgcgtgcgtatgag
gctgtatatgcacctctacgaactaatccagttcaacagaaggagttaaagacttatgag
aggcaaattatcaagcatttacagcagattgctgccacccaacaacaagtggggattaag
tcaagagacttgctgcagttcctcaacagttccatgggggtccctactcagtttttactt
gttactctgggtgcgaagcttctttcacagtgtgagtcgcagattttgaagctaccttcc
tttgcctttgcattggcacaggtcattgttaacgtggcctcccaggtgcccttgttaatc
gatattgtacttgcgaagctacatgaagtttgtatcttcactgtccccaagtattatgta
ttcacaaaggatcaatttgaaaatgatgctgcttactataaagcgctagggtatcgggaa
gaagatgggaaattggaaagcaccgatgattatgtcgcacgtcaggctgcatacatgaca
ttttatggcgcgatgattcagactgatgtggcaggagggaaaaatccccatggattagca
gctgggtgggcttgggttgcacgtttcttaaatagcatcccggcagatcggaataccgcc
tcggctttagaggcgttcttgaagatggcaggattcaggctctatcaagtctatccaaag
ccattcatgaggattatgcaagcaattgtcacggaatatattgaaaacctcaagaaaact
ggtgatggagatgctagagctgtagtttcacgattagagacatttctgcatcttcaaaag
tatttgcaggagcccgagggtaggaagatgcctgtcacagatgtctcatccagcctgaaa
gcgtga
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