Physcomitrium patens (spreading earthmoss): 112286990
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Entry
112286990 CDS
T01041
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112286990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112286990
03009 Ribosome biogenesis [BR:
ppp03009
]
112286990
Messenger RNA biogenesis [BR:
ppp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
112286990
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-60S particles
RNases
112286990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
112286990
NCBI-ProteinID:
XP_024385302
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All DBs
Position
9:complement(8389667..8391621)
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AA seq
251 aa
AA seq
DB search
MEKPQNYYSALASLDDNEDEDQRSSQKDAGASQGSGAAKSSGNGKKKKTGGGRRKEEEVS
ADVKVGRVRMPLVWIDLVMSGLDIEKDRILEIACVVTDGRLERTFEGPDIIVSQPEEILE
GMDVSFREHHAASGLMDGVRASSVTEEEAEQEVLKFVRKYTRGNSGQPLLAGNSVYVDLR
FLNKYMPTLAAEFSHVLVDVSSIRALCVRWYPREAEKQPAKQLQHRSLADIKESIAELKY
LRRNIFKQPQK
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcctcaaaattactactctgcgcttgcttcgctcgacgacaacgaagacgag
gatcagagaagtagtcagaaagatgcaggggcttcgcagggaagcggcgcggcgaagagt
tccggcaatgggaagaagaagaaaactggtggaggaagaaggaaggaagaagaggtctct
gcggatgtcaaggtggggcgcgtgcgaatgccgcttgtttggattgatcttgtgatgtcg
gggctagacattgagaaagacaggatcctggagattgcttgtgtagtgacagacggcagg
ttggagaggacgtttgagggtccggatataatcgtctcgcagccagaagagatcctcgaa
gggatggatgtatcgtttcgagagcatcatgctgcaagcgggctgatggatggtgttcgg
gcaagttcagtgacagaagaagaagctgagcaagaggtgttgaagtttgttcgcaagtac
actagagggaactctggacaacctttgcttgctgggaactcagtatatgtggatctccgg
ttcttgaataagtacatgcccaccttagctgccgaattttctcatgtgttggttgatgtg
agcagcatccgagcgctctgtgtgcgttggtatccgagagaagccgaaaagcaaccggct
aagcaactccagcatcgatccttagccgacatcaaggagagtattgcagagctcaaatat
ctgcgacgaaatattttcaagcaaccgcagaaatga
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integrated database retrieval system