Physcomitrium patens (spreading earthmoss): 112289638
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Entry
112289638 CDS
T01041
Name
(RefSeq) citrate synthase 3, peroxisomal-like
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00020
Citrate cycle (TCA cycle)
ppp00630
Glyoxylate and dicarboxylate metabolism
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01200
Carbon metabolism
ppp01210
2-Oxocarboxylic acid metabolism
ppp01230
Biosynthesis of amino acids
Module
ppp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppp_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ppp_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
112289638
00630 Glyoxylate and dicarboxylate metabolism
112289638
Enzymes [BR:
ppp01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
112289638
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
DUF1347
Motif
Other DBs
NCBI-GeneID:
112289638
NCBI-ProteinID:
XP_024390779
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Position
12:5414879..5420048
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AA seq
519 aa
AA seq
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MEARLSCDEDIGLRLSTSSSRRVAILRNHLESGNTSSSHSLETLAVSAEIAPKFSGGSGT
LTVVDNRTGKKYEFEISEGGTLKATDFQKIVAGGDGQGLRVFDPGYLNTAPVRSTISYID
GDKGILRYRGYPIEELAEKSSFLEVAYLLMYGNLPSKTQLVGWERAVAQHSAVPQTVLSV
IAALPHDAHPMGTLVASICALSSCHPDANPALQGQDLYKSKAVRDKQIVRVLGKVPTLAA
AAYLRMAGRPPVMPSNQLSYSENFLYMLDSLGDRNYKPHPRLARVLDILFILHAEHEMNC
STAAARHLASSGVDVYTALAGATGALYGPLHGGANEAVLKMLKEIGSVEKIPEFLEDVKN
RKRKMSGFGHRVYKNYDPRAKVVRTLADEVFAIVGRDPLIEVAVALEKAALSDEYFVKRK
LYPNVDFYSGLIYRAMGFPTEFFPVLFAVPRMAGYLAHWKESLDDTDTKIMRPQQWYQGE
WLRHYTPESSRGTAGKSETLANIAVSNASKRRLAGASKM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaagctagattaagctgcgacgaagacattggtcttcgtttgtcaacatcgagttcg
aggagggtagccattctgcgaaatcacctagaatcggggaacacttcttcttcacactct
ctggaaactcttgctgtctcggctgagatcgctccaaaattttcaggaggttcgggaacc
ctaactgtggtggacaacaggacagggaaaaagtatgagttcgagatcagcgaaggcggg
acattgaaagccacggacttccagaagatagttgctggtggagatggacagggcctcaga
gtatttgatcctggatatctaaatacagctccagttcgatcaaccatatcatacattgat
ggtgacaaagggattttgcgataccggggttaccctattgaggagcttgctgagaagagc
agctttcttgaggtggcttacttgttgatgtatggcaatctgccatcgaaaacccagttg
gttggatgggagcgtgcagttgctcaacattcggctgtccctcaaacagtcctgtcggtt
attgctgcgcttcctcatgatgcccatccgatgggcacattagttgcatccatctgcgct
ctttcttcttgccatccagatgccaatcctgctctacagggtcaagacttgtacaagtcg
aaagccgtaagagacaagcaaattgttcgtgtgttagggaaggtaccgaccttagccgca
gctgcatatctgcgaatggctggaagaccaccagtgatgccttccaatcaactctcatac
tctgaaaatttcctctacatgttggactctttgggtgacagaaattacaagccacacccc
cggctagccagagtgctcgacatacttttcattttgcatgcggagcatgagatgaattgc
tctactgctgctgcccgccaccttgcttcaagtggtgtggatgtgtatacggctttggct
ggagctacaggagccctttatggcccattgcatggtggtgcaaacgaggctgttttgaag
atgttgaaagaaattggcagtgttgagaagatccccgagtttttggaagatgtgaaaaac
aggaaaaggaagatgtctggattcggccaccgtgtttacaagaattacgatcctcgtgct
aaggtggttcgaactctggcggatgaagtgttcgccatcgtaggtcgtgacccactcatt
gaggtagccgttgctctggaaaaggcggccctttctgatgagtacttcgtgaagaggaaa
ctttatcctaatgttgacttctattctggtttaatttacagggcaatgggattcccaaca
gaatttttcccagtattgtttgctgttccacgtatggctggatatcttgcacattggaag
gaatcccttgatgacaccgacacaaagattatgcgcccccaacagtggtaccaaggggaa
tggttacgccactatactcctgaaagtagccgcggcacagcaggaaagtctgagaccttg
gcgaacatcgctgtctcaaatgcatccaagcgcagattagctggagctagtaaaatgtaa
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