Physcomitrium patens (spreading earthmoss): 112289997
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Entry
112289997 CDS
T01041
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like
KO
K13098
RNA-binding protein FUS
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03015
mRNA surveillance pathway
ppp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112289997
09122 Translation
03015 mRNA surveillance pathway
112289997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppp03041
]
112289997
Spliceosome [BR:
ppp03041
]
Complex A
Other components
Complex A specific factors
112289997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
RRM_7
Motif
Other DBs
NCBI-GeneID:
112289997
NCBI-ProteinID:
XP_024391594
LinkDB
All DBs
Position
12:2738319..2741401
Genome browser
AA seq
339 aa
AA seq
DB search
MSGYVGGGGGGRYHDGGGSGGAIGDRGGPRGGGGGGQRGGFRDGGAGGRGGYGGGGGGYG
GGGVHGGYGGGGGGFDRGGPRGGGGGDRSGDWTCPNVTCGNVNFARRMECNKCQAPKPQS
TGGGGGGGGGYGGEQGGGSYGGRQGGGNSYDEPGHGGYGGRGYDREQGRSHESRGGGGGG
GYGAQSREESKDAVDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELRELFGGIGQVAR
IKQKRGYKDQWPYNIKIYQDESGKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAM
AAKSAPKPPPPSGGGYRGGHRGGGGPDRRDGGGYRPRPY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttacgtaggagggggcgggggtggccgatatcacgatgggggaggttcaggg
ggtgcgataggtgatcgaggaggcccgcggggtgggggtggaggtggtcagcgtggtggc
tttcgcgatggaggcgcaggagggagaggaggttatggaggtggtggtggagggtacggt
ggaggtggagtccatggtggctatggcggcggcggcggagggttcgatcggggaggccca
cgagggggtggaggcggggacagaagcggggactggacatgccccaacgttacctgcggc
aacgtgaattttgcgcgaaggatggaatgcaacaagtgtcaagctccaaagcctcaatct
actgggggcggaggaggtggtggtggtggatatggaggggaacagggcggaggaagctac
ggtggaagacagggtggtgggaacagttatgatgagcctggtcatggtggatacggcggg
agaggttacgaccgagagcagggtagatcacacgaaagcaggggaggaggaggaggagga
ggatacggagctcagtcaagagaagaaagcaaggatgcagtggatgttccagtgaagcaa
tgtgatgaaaactgcggcgatagttgcgataatgcaagaatttatatttcagggttgcct
ctagatgtgaaggaagacgaactgcgagagcttttcggcggtattggacaggttgcaaga
attaaacaaaagcgtgggtacaaagatcagtggccgtacaacatcaagatatatcaagat
gaaagtggaaagaataagggagatgcagtgttgagctatgaagatccacacgccgcgcac
tcggcgggaggcttttttaatgattacgaaatgagagggcacaaaataaaagttgctatg
gcagcaaaatcagccccgaagccgcctcccccgagcgggggtggatatcgcggcgggcac
cgtggcggtggtggccctgacagacgtgatggtggtggttatcggcctcgtccttactga
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