KEGG   Physcomitrium patens (spreading earthmoss): 112290298
Entry
112290298         CDS       T01041                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ppp  Physcomitrium patens (spreading earthmoss)
Pathway
ppp03030  DNA replication
ppp03410  Base excision repair
ppp03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ppp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    112290298
   03410 Base excision repair
    112290298
   03420 Nucleotide excision repair
    112290298
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppp03032]
    112290298
   03400 DNA repair and recombination proteins [BR:ppp03400]
    112290298
Enzymes [BR:ppp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     112290298
DNA replication proteins [BR:ppp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    112290298
DNA repair and recombination proteins [BR:ppp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      112290298
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 112290298
NCBI-ProteinID: XP_024392202
LinkDB
Position
13:2786157..2805786
AA seq 2249 aa
MRGRGRGPSGGRGDGGRSRSARGRPRESSKFGNEGRIEDGHKDGGGSVRRVGRSKVWRTS
EDALEASFGYQIFTEGEPRLGWLLNMVSSAMDDPNNDNITYSCVNLYFMCQDGSTFKAQF
KFAPYFYLGTKENTELEVDAYLRRRYEGQIANIEIVNKEDLDLKNHLSGLQSKYLKLSFN
TVQELMNVKSELLPLVQRNQAKLDAAQAYESLFNNSASKAPGKMQDYIEYMVDMREYDVP
YHVRFAIDNDIRCGLWYMVSVESSQTKLERRTDLLQRAEVRVCAFDIETTKLPLKFPDAS
YDSVMMISYMIDGQGYLIVNRECVGAEIEDLEYTPKPEFEGHFKVTNTRTEKELLVSWFS
HMREVKPSIYVTYNGDFFDWPFIQARALHHGMRMHDEIGFQHNETLGECLSKFACHLDCF
AWVKRDSYLPQGSQGLKAVTKAKLGFDPLEVNPEDMVRFAIEQPQTMASYSVSDAVSTYY
LYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAFKGNIICPNKHKSEQEKVY
NGKMLESETYIGGHVECLESGVFRSDIPTRFHLTPEAYQGLINNLDRDLKYAIEEEGKLE
LESVTNYDEVKEDIKLKLVNLRDTPIRDERPLIYHLDVAAMYPNIILTNRLQPPSIVTDE
ICAACDFNRPGKTCMRELEWVWRGETYAAKRSEFMHLKNQIESEQFPSIADGGPLRYFRD
LPKDEQQSKLKDRLKKYCQKVYKRVLEKPITDVRSASVCMRENPFYVDTVKSFRDRRYEY
KGLNKVWKGKLGDAKASGNPIKIQEASDLVILYDSLQLAHKCILNSFYGYVMRKGARWYS
MEMAGVVTYTGAKIIQNARVLVEQIGKPLELDTDGIWCCLPGSFPENFTFKTKNGKKLTI
SYPCVMLNVDVALNNTNDQYQTLVDPVSRTYATTSECSIEFEVDGPYKAMIIPASKEENV
LLKKRYAVFNHDGTLAELKGFEIKRRGELKLIKVFQAEIFDNFLHGATLEECYASVAAVA
NRWLDMLENQGIDVADSELLEYISESSTMSKSLEDYGDRKSCATTTARRLADFLGDEMVK
DKGLSCRYIVARDPQGAPVSERAIPVAIFDAEPEVMRVYVRKWCKCSADVAIRSIVDWGY
YRQRLNSAIQKIITIPAALQKVANPVPRVVHPDWLWKRIREKDDKYRQRNLKDMFGPKVA
QAEEPISEDGSEADLEDMVGTKLTGRKMPRPIIRVYDKDKQISNVQMTNKSVIEDGIEMP
PARQVRETTPDKNDDYEAWLEHKKRKWKEARDKRKRSRPENATGGALRNSLISKGGKAAR
SKPGVGAFFRNREAALTHSHWQILHLALGQRSGEFTAWVLADGDMYKVPLKVPRVFYLNT
QATNTEEYPGVRVTRTLPHGRPVFNLIEVVVDEEQFKLAGRKLAAHLADPEVEGVYETKM
PLSLHALLQLGCVCKVDSKARNRTIRDGWSLNDLHMKTTTECSYLMDDLPYIFLYHSWME
NRGLYALYTPVISRILVVVVNPFNNREIAIAQLERQFRDAVRNQSQSNVDTSELTCKVEY
VSSNADAGRLLQKTLIEYRDQHRGPTLAVVECPNLDTTKNTISALSELPCIQVSCNARDS
NYQTLGWQPLAGRVAMQRCAASSIWLQERITLARYAHVPLGNFDSDWLLFTADTFYARAL
RDHMQVLWVSNDGIPDLGGVPEEEPSFADEVQQPALIFPGAYRSISIELKVHHLAVNALL
KSSQINELEGGALLGFNSESQDAVSLGVGQTNWDESVSCAPAFRILKQLVQGWLSDAVSS
GNTFADVLLQHLYRWLCSPTSKMHDPALHRILHKIMQKVFALLLAELRKLRATIVFADFS
RIIIATGKYNMAAAQGYCEYLLKTLKSRELFEWLELEPKRYWHALLFMDQYNYGGIQAKD
VRTDLDASDLSQDPTQNGANEIISSWNIAEFLPKVTQDYFVVIVSEYIYIPWKHSQDQAA
LLAAARGGDFASSTPSVSISTASDAEAQEVSYLKEQIASYFTDKLLRVVRDVQRHINARR
DEEDSEAQLSRQFPKLAGSHLVMTDPALEFIKQVCAVLALDNRVQHNVMVMRKNLLKLVH
VREFSAEAAFEDPCRSFTLPNVICSYCNDCRDLDLCRDAALLEHDWRCVVPSCGQPYDRA
WIENALLQIVRQRERLYHLQDLVCVKCRQVKSSHLADQCQCAGAFKNTTSPAVFEKELQV
FLNIAKYHGFELLEEVVTWLVTPLVRTAS
NT seq 6750 nt   +upstreamnt  +downstreamnt
atgagagggcgaggaagagggcccagtggagggaggggagatggtggccggagcaggtct
gcacgcggaagaccgagagaaagtagcaaatttggcaatgaaggccgaattgaagacggc
cacaaggatgggggtggcagtgtaaggagagtagggagatcaaaggtatggcgaacttcc
gaagatgcattggaggcaagctttgggtaccagatttttaccgaaggagaacctcggcta
ggatggcttctcaacatggtctcgtcggcgatggatgatcctaataatgacaatattaca
tacagctgtgtcaacctctactttatgtgccaggatggatccaccttcaaggcacaattc
aagtttgctccttacttctatttgggtaccaaggagaacacagagttggaggttgacgct
tacctaagacggcggtacgaggggcaaattgcaaatattgagatagttaacaaagaagac
cttgatttgaaaaatcacctttcaggtctgcaaagtaaatatttaaaacttagcttcaac
actgtgcaagagctgatgaatgtaaagagtgagttactacccttggtacagcggaaccaa
gcaaagctggacgctgctcaggcttatgaatcactcttcaataattcagcaagcaaagct
cctggaaagatgcaggattacattgagtatatggtagacatgagagagtacgatgtccct
taccatgtcaggtttgcaattgataatgatatcagatgtgggctctggtacatggttagt
gttgaatcttctcaaacgaagttggaaaggagaacagatctattgcaacgtgctgaggtg
cgagtttgtgcatttgatatcgagacaacaaagttacctttgaagttccccgatgcatcg
tatgacagtgtgatgatgatatcttacatgatcgacggccagggatatcttatagttaat
cgagagtgtgtaggtgctgagattgaggaccttgagtatactccgaagccagagtttgaa
ggtcactttaaggtcaccaacacacggacggagaaagagctgcttgttagttggttttct
catatgcgggaggtgaagccaagtatctatgtcacgtacaatggtgacttctttgattgg
cctttcattcaagcacgtgctcttcatcacggaatgaggatgcacgatgagatagggttt
caacataatgaaactctaggggagtgtttgagtaagtttgcttgtcatttggattgcttt
gcatgggtgaagcgtgacagttacttgccgcaaggaagtcaaggtctcaaggctgtaacg
aaggctaaattgggtttcgatccgttggaggttaatcctgaagacatggttcgctttgct
attgagcaaccacagacaatggcttcctactcagtctcagatgctgtctcaacatattac
ttgtacatgacatatgtgcatccttttatcttttctctggcaaccatcattccaatgtct
ccagatgaggttttgcgcaaaggctccgggacactttgtgaaatgcttctaatggttcaa
gccttcaagggaaacattatctgccccaacaaacataaatctgagcaagagaaggtttac
aatgggaaaatgctggagagcgaaacctacattggtgggcatgtggagtgtctggagagt
ggagtctttcggtccgatatccccacacggttccacctgactcctgaagcgtatcagggg
ttgattaacaatctcgatagggatttgaagtatgcaatcgaagaagaaggaaagctcgag
ttggagtcggtgactaactatgatgaagttaaggaggatattaaactcaaacttgtgaac
ctacgtgacactccaattagggatgagcgtcccctcatctatcatctggatgtggctgcc
atgtatcccaacatcattctcacaaatcgacttcagccgccatctatagtaacagacgag
atctgtgcggcctgcgacttcaaccgtccaggcaagacttgcatgcgagagttggagtgg
gtctggagaggtgaaacctacgctgctaaacggagtgaattcatgcatcttaagaatcaa
attgagtcggaacaattcccttcaattgcggatggggggccattaagatacttccgtgac
ctccccaaggatgaacagcagagcaaattgaaggatcggttgaagaaatattgtcagaag
gtgtacaagcgagtgctggaaaaaccgatcacagatgtccgatcggccagcgtctgcatg
cgagaaaatccgttctatgtggatactgtcaaaagctttcgggataggcgttatgaatac
aagggtctaaacaaggtttggaaagggaagctcggagatgcgaaagctagtggcaacccg
atcaaaattcaagaagcttcggatttggtcattttatatgattcgcttcaattagcacac
aagtgcatcctcaattctttctacggatatgtcatgcgcaagggagctcgctggtactcc
atggagatggcaggtgtcgttacatataccggggcaaaaattattcagaatgcccgtgtc
ttagttgagcaaatcgggaaaccactagaacttgacacagatggaatttggtgttgcctg
cctggatctttccctgagaactttaccttcaagaccaaaaacggaaagaagctcacaatt
tcatacccttgtgtgatgctcaatgttgatgttgctctcaacaataccaacgaccagtat
cagacgttggtggatcctgtatcgcgaacttatgcaacaactagtgaatgctccatcgag
tttgaagttgatggaccttataaggctatgatcatacctgcgtctaaggaagaaaacgtc
cttctcaagaagcgttatgccgttttcaatcacgatggtacattggcagagttgaaggga
tttgaaataaagcggcgcggagagcttaaacttatcaaggtgttccaggcagaaattttt
gataattttttacacggtgcgactttggaggagtgctatgcctctgtggctgccgttgca
aatcggtggttggatatgcttgagaatcaaggtatcgatgttgcagatagtgagttattg
gagtatatttctgaatcaagtacaatgagcaaatctttagaagattatggtgatcgaaaa
tcgtgtgccactactacagcccggcgattagctgattttttgggtgatgagatggtcaaa
gacaagggacttagctgtcgttacattgttgcccgtgatccacagggtgcgcctgtgagt
gagcgagcaattcctgtcgccatttttgatgctgagcctgaggtgatgagggtatatgtt
cgaaaatggtgcaagtgttcggcggatgttgccattcgtagtattgtagattggggttat
tatcgccaacgtctcaattctgccattcaaaagatcatcactattcctgcggcccttcaa
aaggttgcaaatccagttccacgtgtagttcatcctgactggctttggaagaggattcga
gaaaaagatgataagtacaggcaaagaaacctgaaagatatgtttgggccgaaggttgct
caagctgaggaacccatttccgaggatggctctgaagctgatctagaagacatggtcggt
accaaattaactggtcgtaaaatgcctcgaccaattattcgtgtatatgataaagataaa
caaattagtaatgtacaaatgacaaacaaatcagtaatagaagatggaatcgaaatgcca
cctgctaggcaagtgcgagagaccactcctgataagaacgatgactatgaagcttggttg
gagcacaaaaaaaggaaatggaaggaggcccgagacaaacgaaaacgatctagaccggag
aatgctactggcggagcattacgcaattccctcataagtaaaggtggtaaagcagctcga
tcaaagccgggtgtgggagctttttttcgcaatagagaagctgccttgacacactctcat
tggcagatattgcacttggctctcggtcaaaggtcaggggagttcacggcttgggtactc
gcagatggtgatatgtataaggtccctctgaaagttccacgtgtgttttatctaaataca
caagccaccaataccgaagaataccctggagtacgtgtaactcgtactttgccacatgga
cgaccagtttttaatcttattgaggtagtagtagacgaggagcagtttaaattagcagga
aggaaacttgcagcgcatcttgcagatcctgaagtggagggagtatacgagacaaagatg
ccactatctctgcatgctttgctgcagcttggatgtgtgtgtaaagttgattcaaaggcg
cgaaaccgtacgataagggatggatggtctttgaacgatcttcacatgaaaactactaca
gagtgctcatatttgatggacgatctaccatatatctttttgtatcacagctggatggaa
aacagggggctgtatgctttgtatacgcctgtgatttccaggatattggttgtggtcgtt
aatcccttcaataatcgtgaaattgccatcgctcagctggagcgtcaatttcgtgatgca
gtccgtaaccagagccaatctaatgtcgacacttctgaattaacatgcaaggttgaatat
gtatcaagtaatgcggatgcaggacgactcttacaaaaaacacttattgagtacagggat
caacatcgaggtcctactctagctgttgttgagtgtcccaatttggatacaactaagaat
acaatttcagccctctctgaactaccatgtatacaagtttcatgcaatgctcgtgatagt
aattatcagacccttgggtggcaacctctagctggtagagtggccatgcaacggtgtgca
gcatctagtatatggcttcaggagaggattactctagcacgatatgcacatgttccgctt
gggaatttcgattcggactggcttcttttcactgccgacactttttatgcacgtgcttta
cgtgatcatatgcaggtgctttgggtctcaaacgatggaataccagatttgggaggagtt
cctgaggaggagccaagctttgccgatgaggttcaacagccggctttgatctttccaggc
gcttaccgaagtattagtatcgagcttaaggttcatcaccttgctgtgaatgctttactg
aaaagcagccagatcaatgagctagaaggcggtgctctcttaggcttcaattcagaatct
caggatgcagtttctcttggggttggacaaacaaattgggatgaaagtgtgtcttgtgca
ccagcctttcggattctaaaacaacttgtacaaggctggcttagtgacgctgtgtcatca
ggcaacacatttgcagatgttctcttgcaacatctttaccgttggctctgcagtccaaca
tcaaagatgcacgatcctgctcttcaccgtattcttcacaagattatgcagaaggttttt
gcactgttgcttgcggagctgcggaaattgagggccaccatagtctttgcagatttttcg
cgcataattatagctactggaaaatataatatggcagctgctcaagggtactgcgagtac
ctgttgaaaactttaaaatctagggagttgtttgagtggttagagttggagccaaaacgg
tactggcatgctctgcttttcatggatcagtataactacggaggcattcaagcgaaagat
gttcggacagaccttgatgccagcgatctatctcaggatcctacacagaacggggcaaat
gagatcatttcaagctggaatattgcagagtttcttccgaaagtgactcaggactacttt
gtggtgatagtttcagaatacatctatatcccatggaagcactctcaagatcaggcggct
ttgcttgcagcagctaggggtggagattttgcatcaagcactccgtctgtctcaatttct
acagcctctgatgcggaagcacaagaagtttcatatctcaaagaacagattgcgtcctac
tttacggacaaattattgagggtagtacgagatgtgcaaaggcacataaatgcaaggaga
gacgaggaagattctgaagctcaactttcgcgacaatttccaaagttggctggttcacat
ctggtcatgactgatccagccttggaattcatcaagcaagtgtgtgctgtactggctctt
gataatcgtgttcaacacaatgtaatggtaatgaggaaaaacttgttgaagttggtgcac
gtcagagaattctctgcagaagctgcatttgaagatccatgccgctcattcactctacca
aatgtcatatgcagttattgtaatgactgtagggatctagatctttgccgtgatgctgct
ctgttggagcatgattggcgctgtgtggtgccctcttgtggccaaccgtatgatcgcgct
tggattgagaacgcactgctccaaatagtgcgtcaacgagaacgtctgtatcatctccag
gatctcgtctgcgtaaaatgtcgtcaggtaaagtcatctcatcttgccgatcagtgtcaa
tgtgctggagcgttcaaaaacacaacaagcccagctgtgtttgaaaaagaattacaagtg
tttctgaatattgctaaataccatgggtttgagttactagaagaggttgttacctggctt
gtaactcctttggtgcgaacagcttcatga

DBGET integrated database retrieval system