Physcomitrium patens (spreading earthmoss): 112293669
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Entry
112293669 CDS
T01041
Name
(RefSeq) protein TRANSPARENT TESTA 9-like isoform X1
KO
K19513
protein CLEC16A
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112293669
03029 Mitochondrial biogenesis [BR:
ppp03029
]
112293669
Membrane trafficking [BR:
ppp04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112293669
Mitochondrial biogenesis [BR:
ppp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112293669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FPL
CLEC16A_C
Motif
Other DBs
NCBI-GeneID:
112293669
NCBI-ProteinID:
XP_024399128
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Position
16:5350279..5358750
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AA seq
815 aa
AA seq
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MWFWRPRERFSMSELTYLNEQLQNTTLITESSKNYLVETIRSMAELLIWGDQHDPAFFDF
FMEKQVMATFVRILKSSSKTTTVAVQLLQTLSIMIQNIRSEHAIYYLFSNEYINYLITFP
FNFQNEELLAYYIIFLRTISMKLDRNTVSFFIKTNNEEVVSFPLYTEAIKFFHHEEGMVR
IAVRTITLSVYRVDDESIRTFVTNPPIVDYFSDLIVFLRKQSHALDGLVTEVSKYPDSGQ
LRGRLEGAIAEIGDLLYYCNDIINSNVPALKSIMTKNIMNSLVLPLLLPSLRPVDECATT
PSDERVSTLTSLYFLLRLLHIVHHKALVNSIGASLLRTDQAVALDHEQLQNSECFPHQLS
EAETLGDEASESGAGTANSFEVSSSSRALDGRTMLLSYLLSNDDKLVMASLCLSVSFLHN
EALDESLLDALGILPRRKRHKKLLLQQLIGGKSDKEVDRLFSPSLDRPRDDFMSDNWENH
LGDDLLSGSTTLKHRSQMLEALLKLMCRRPPPYSEVLWQAGWLLRQLLPYHEHKISDTHM
SLLNDVYTAAQQELSVELTDCWADIIPAVIAEEWKFCRKALDTPFLQKDASFVLMPSTQI
NTEENLPVTSSILVGERMLASVKTLMVLYQIRILLVGSTLTETPPLVELPEDMRGQHPIP
STKIGTELDISDDAMLCRVSFERGKERCVHLVVVLRGTTGSLLLIEDNSSDQRRGLIRGT
APLAGSDPRIDEKHATWLHLRIRSPHQPLADVGKRGLPKTSPRNKNLVDGRWVLAFEDAE
ACKHACLFIQNKLANLRDAVSLIVSAFLTKDSLQQ
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtggttctggcgccctcgagagcgcttttcaatgtcggagcttacatatctcaacgag
caacttcaaaatacaactttgatcacagaatctagtaagaactacctcgttgagacgatc
agatcgatggccgaacttttaatctggggagatcagcacgatcctgcgttctttgatttt
tttatggagaagcaggtaatggccacttttgttcgcatcctgaagagcagtagcaagaca
accaccgttgccgtgcaactattacaaacgctgagcatcatgattcagaacatacgaagt
gaacatgccatttattatctattcagcaatgaatacatcaattaccttattacgttccct
tttaatttccaaaacgaagagcttctggcttattatatcatctttttgaggactatcagc
atgaaattggaccgcaacacagtttcattctttatcaagacaaacaatgaagaagtggtc
tcctttcccttgtacaccgaagccattaagttctttcaccatgaggagggtatggttcgc
attgctgttcgaactattactctaagtgtatatcgtgtggacgatgaaagcatccgaacg
ttcgtgacaaacccgccaattgtggactatttcagtgaccttattgttttcctaaggaag
caatcacatgccctggatggcctggttactgaggtttcgaaatatccagactctggacaa
ttgcgtggaagattagaaggagctatagctgaaattggcgatctcctttattattgcaat
gacatcataaattctaatgtacccgctttaaagtcaatcatgacaaagaacatcatgaac
agcttggttttgcctttgttgctgccttctttacgtccggtcgatgaatgtgccaccaca
ccatcggacgaacgtgtcagcactttgacatcgctttattttctgttgcgactgttacat
attgtgcaccacaaagctttagtcaacagcattggggcgtcactattgaggacggaccaa
gcagtcgctcttgatcacgagcagcttcaaaattctgaatgctttccgcatcagctcagt
gaagctgaaactttaggtgatgaagcaagtgaatcaggagcagggactgctaattctttt
gaagtgtcaagttcttcacgagcattagatggccggaccatgttgctatcatatctcctc
agcaatgacgataaattggtgatggcttctttgtgcttatcggtgtcttttctgcacaac
gaagctttggatgaatcactgctagacgcacttgggattcttcctcgtcgaaaacgtcac
aaaaagcttcttttgcaacaattgattggcggcaaatccgacaaggaagtggaccgactc
ttctcaccatcattggatcggcctcgtgatgactttatgagtgataactgggaaaaccat
ctcggggacgatttgctgtcggggtccaccacactgaaacatcgtagtcagatgcttgaa
gcattgttaaaattgatgtgtcggagacctcccccctattcagaggtgctatggcaagca
gggtggctgctgcgccagcttttgccatatcatgagcacaaaatcagtgatactcacatg
tcgctgcttaatgacgtatatacagctgctcagcaagagctctctgttgaattgactgat
tgctgggcagatatcatcccagcagtgattgcagaagagtggaaattctgccgtaaagca
ctggacacaccttttctccagaaggacgcttcttttgtgttgatgccaagcactcaaatt
aacactgaggaaaatctaccagtgacttcctcgattcttgttggggaaagaatgctggca
tctgtcaagactttgatggttctttatcaaattcgcatccttcttgtggggagcaccttg
acagagacgcctcctctagttgagttgcctgaagacatgaggggtcaacatccaattcca
tcaacaaaaatcggcacagaattggacatttcggatgatgctatgctatgtagggtctca
tttgaaagagggaaagagcggtgtgttcatctcgtggtggtgttgagaggaacaacagga
tcgttattgttaattgaggacaattccagcgatcagcgccgtggactgattcgtggcact
gcacctttagctggatcagatcctagaatcgatgagaagcatgcaacttggctacattta
cggatacgatcgcctcaccagcctctggcagatgtcgggaaacgaggtcttcccaaaaca
agtccaaggaataaaaatcttgtggatgggcgatgggttcttgcttttgaagatgcagaa
gcgtgcaaacatgcctgtctcttcatccagaacaagctggctaatttgcgggatgctgtt
agtcttattgtatcagcttttttaaccaaggattctctgcagcagtag
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