Physcomitrium patens (spreading earthmoss): 112295685
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Entry
112295685 CDS
T01041
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03013
Nucleocytoplasmic transport
ppp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112295685
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112295685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112295685
04131 Membrane trafficking [BR:
ppp04131
]
112295685
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112295685
Membrane trafficking [BR:
ppp04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
112295685
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
112295685
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
112295685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
112295685
NCBI-ProteinID:
XP_024403303
LinkDB
All DBs
Position
19:complement(5763074..5765342)
Genome browser
AA seq
310 aa
AA seq
DB search
MGATGGVKDAGSEQVVESGHQDVVHDVAVDYYGKRMASCSSDRLIKVFAVGSGDVPTMPL
ASLSGHEGPVWQVAWAHPKFGSILASCSYDRKVIVWREGAENEWQKDQVFQEHESSVNSI
CWAPSEFGLCLACGSSDGTISVLTHKPDGSWEKVKIEQAHPVGVTSVSWAPASAPGSLIG
PDPGPVQKLASGGCDNTVKVWKFVNNNWKLDCFPPLSKHVDWVRDVAWAPNLGLVRSTIA
SASQDGTVVIWTQAKDGDQWQPLTLNDFKTPVWRVSWSLTGNILAVSDSCNKVTLWKEEV
DGEWAQVTSV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggggccacagggggagtgaaggacgcaggtagtgagcaggtggtagagtcagggcac
caggatgtggtgcacgatgtggccgtggattactatggtaagcgaatggcgtcgtgttcc
tcagatcggttgataaaggtgttcgccgtcggctctggagatgtgcctacaatgcctctc
gcaagcttgtccgggcatgaaggtcctgtgtggcaggtggcatgggcgcatcccaagttc
gggagcattttggcttcgtgttcttatgatcggaaggttattgtgtggagagaaggtgcc
gagaacgaatggcagaaagatcaggtattccaggagcatgagtcatcagtgaacagtatt
tgctgggcacccagtgagttcgggctgtgtctagcttgtgggtcatcagatgggactatt
tctgttcttacacacaagccggatggttcatgggaaaaagtcaagatagagcaggctcat
cccgtgggggtgacttctgtgtcgtgggcgcctgcaagtgctccggggtctcttattgga
cctgacccagggcctgttcagaaacttgcgtctggtggttgtgacaacaccgtgaaggtc
tggaaatttgtgaataataactggaagctagattgctttcctcctctttctaagcatgtc
gactgggtacgagatgttgcatgggctcctaatcttggtctcgtgcgttccactatcgct
agtgcatcccaagatggcacagttgtcatttggacccaggctaaagatggggaccaatgg
cagcctctgactttgaatgatttcaagactccagtgtggcgggtaagctggtctcttaca
ggaaatatattagctgtgtcagactcatgcaacaaggtgacgttatggaaagaagaagtt
gatggtgagtgggcacaagttacgagtgtgtaa
DBGET
integrated database retrieval system
