Paenibacillus polymyxa SQR-21: PPSQR21_003000
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Entry
PPSQR21_003000 CDS
T03178
Name
(GenBank) spore germination protein ka
KO
K06295
spore germination protein KA
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
PPSQR21_003000
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GerA
Sigma70_r3
UPF0182
Motif
Other DBs
NCBI-ProteinID:
AHM64011
LinkDB
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Position
complement(349232..350827)
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AA seq
531 aa
AA seq
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MRFRKRTPLNKFRKAPVQQSESKSEHSVEQLSANIGTNLQQIRQALGNSTDIVIREIRIG
KDGDQTIAILYTDGLVDQNIVSDFIMESMMLDSSLSRDVECRIQASSNVMQMLKDYALTI
GSIRDITDFEALYNALLSGDAIILIEGETQAISASARGWKDRGVTEPASENVVRGPREGF
SETLRTNTALIRRKIKDPNLWLETKQIGRVTQTDVAVMYIKGIVNPKLVEEVHERLNRID
VDGILESGYIEELIQDKTFTPFPTVYNSERPDVIAAELLEGKIAILVDGTPFVLVVPALF
VSFLHAAEDYYQRADISSFIRVLRYTGVFISLLGPSLYVAITTFHQEMLPTSLLIGLAAQ
REAVPFPAFIEALMMELTFEILREAGVRMPKYIGAAVSIVGTLVIGQAAVEAGIISAAMV
IVVSITAISSFVLPAYNMSIAFRMLRFPLMGLAASFGLFGIIVGGIALILHMCSLRSFGV
PYMTPFAPLIPADTKDTIFRFPHWMMMSRPRLVDQKNVKRRNSTPPRKSRE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcggaaaagaaccccccttaacaaatttagaaaggcacccgttcagcaaagc
gagagtaagtctgaacattccgtagaacagctcagtgcaaatatcggaaccaatcttcag
cagatcagacaagcgctcggcaacagcaccgacatcgtcataagagaaattcgaatcggc
aaggacggtgaccagaccattgcgatcctctataccgacggtttggtggaccaaaatata
gtctccgacttcattatggaatcaatgatgctggacagcagcttgtccagggacgtggaa
tgccggattcaagcctcctctaatgtcatgcaaatgttgaaagattacgcccttactatt
ggcagcatccgggatattactgactttgaagccttgtataacgcgctgttgtcgggggat
gcaatcattttgattgagggtgagacgcaggcaatatcggccagcgcacgtggatggaag
gatcggggggtcaccgagcctgcctcagaaaatgtcgtccgtgggcctcgggaaggattt
tctgagacattgcgtacgaacacagccttgattcgacgtaaaattaaagatccgaatcta
tggctggagaccaaacaaatcggtcgtgtaacccagaccgatgtcgctgtcatgtatata
aaggggattgtgaaccctaaattggttgaggaagtacatgaacgattgaatcgcattgat
gtagacggcattctcgaaagcgggtatatcgaggaattaatccaagacaaaaccttcacc
ccctttccgacagtatacaattcagaacgcccagacgtgatcgccgccgaactgctggaa
ggaaaaattgcaatcctggtggatggtaccccttttgtgcttgtcgtgcctgcattattt
gtttccttcttgcatgcggcggaggactattatcagcgtgcagacattagcagcttcatc
cgtgtccttcgttataccggagtttttatttccttgctcggtccgtccttatatgttgcc
atcactacgtttcatcaggaaatgctgccgacctcactgctaatcggtctagcagcacag
cgcgaagcggtccccttccctgcctttattgaagcactcatgatggaactgacatttgaa
atattgcgggaagctggcgttcgcatgcccaagtacattggggcagccgtctctatcgtc
ggcacactcgtcattggacaagctgctgtcgaggcgggcatcatatctgcggcaatggtt
attgttgtatcgattactgctatttccagctttgttcttcctgcctacaatatgtctatc
gcttttcgcatgctgcggtttcccttaatggggcttgccgcttcctttgggctgttcgga
attatcgtcggaggcattgccctgatcctgcatatgtgcagccttcgttcattcggcgtt
ccctatatgactccttttgcacctctcataccggcagacaccaaagataccatctttcga
ttccctcactggatgatgatgtcacgtccccggttagtcgatcagaaaaatgtcaaacgt
cgaaacagcactccgccccgcaaatcacgggaatag
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