Paenibacillus polymyxa SQR-21: PPSQR21_020980
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Entry
PPSQR21_020980 CDS
T03178
Symbol
hrpA
Name
(GenBank) hrpA
KO
K03579
ATP-dependent helicase HrpB [EC:
5.6.2.6
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PPSQR21_020980 (hrpA)
Enzymes [BR:
ppq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PPSQR21_020980 (hrpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
AAA_19
AAA_30
Flavi_DEAD
AAA_22
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHM65746
LinkDB
All DBs
Position
2326520..2327827
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AA seq
435 aa
AA seq
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MTDKQLPITQVIPELKHALLSHSAAVLIAQPGAGKTTVTPLELLHEPWLAEQKIIMLEPR
RLAARAAAAQMARALGESTGKTVGYRVRMDTKVGPSTRIEVVTEGVLTRMLQLDQALEGV
GLIIFDEFHERSLHADLGLALALQSQALLRPDLKILIMSATLEAEPVCRLLGDAPLLECP
GTVFPVETLHMSKPSSTSLESFTAETVEKALYVHEGDLLVFLPGAREIHRTERELMSRNL
PDYVKIIPLYGSMKLEQQDEAIRPSAPGSRKVVLATSIAESSLTIAGITVVIDSGLSRES
VFSARTGMSRLTTVKVSKASADQRRGRAGRLQPGVCYRLWSAQEHAALPDASRPEIAAAD
LAPLALEPRSRWSWRPGACASLPSWPGWMLHLRRRTSRQQVYCVSLAAWKSQPMAQQAAS
PRMGARYPPWVRTRA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgacagataaacaattgcctattacgcaagtcatccccgagcttaagcatgccttgcta
tcccattcagcggcggtcctgattgcacagccgggagcggggaaaacaacagtaacacca
ttagaactgctgcatgagccgtggctggcggagcaaaagataattatgctggagccgcga
cgcttggcagcacgtgcggcagcagcgcaaatggcaagggcgctaggcgagtcaactggg
aagaccgtaggttaccgggttcgtatggatacaaaggtaggaccaagcacgcggattgaa
gtggttacggagggcgtactgacccggatgttgcaacttgatcaggctttggagggagtc
gggctgattatttttgatgagtttcacgaacgcagcttgcatgcagacttgggcttggca
cttgccctgcaaagccaggcgctgctgcgaccggatttgaaaatattaatcatgtctgcc
accctagaggcagagcctgtatgtagactgctaggggatgcacccttactggagtgccca
ggcaccgtatttccggtagaaaccttgcatatgtccaagccttcgtcaacctcattagag
tcttttacggctgagacggtagaaaaggcgctttatgtccatgaaggcgatttactggtg
tttttaccaggggctagagaaattcatagaacagaacgagaactgatgtccagaaattta
ccagactacgtcaaaatcattccgctgtacggcagcatgaagctggagcagcaagatgag
gcaatacgcccgtcggctccgggcagccgtaaagtggtattagccacctcgattgccgag
tccagcttgaccatcgccgggattacggtggtgatcgatagcggactgtcacgcgaatca
gtgttttccgcgcgaaccggcatgagccgtttgaccaccgttaaggtgtccaaggcctct
gccgaccagcggcgcgggcgggcgggtcgtctccagccgggcgtatgctatcggctatgg
agtgcgcaggagcatgccgcgctccctgatgccagccgcccggaaatcgcggcggcggat
ctggccccgctcgcgctggagccccgctcgcgctggagctggcggcctggggcgtgcgcg
agcctgccgagctggcctggctggatgctccacctgaggcggcgtacctccaggcaacag
gtctactgcgtcagcttggctgcctggaagtcgcagccgatggcacagcaggcggcatca
ccgcgcatgggcgcgaggtatccgccttgggtacgcacccgcgcttag
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