Paenibacillus polymyxa SQR-21: PPSQR21_025840
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Entry
PPSQR21_025840 CDS
T03178
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSQR21_025840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_025840
Transporters [BR:
ppq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PPSQR21_025840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHM66226
LinkDB
All DBs
Position
2999794..3001329
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AA seq
511 aa
AA seq
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MFKRSYFKLCIPAVMAVMMTACASSPSTTSTSSTAPQDKSVTLLFNVQSPSIDPHTDINY
TAVRAGVNETLIKVNKDLKLEAWLAEKWDSKDGRHWTFSIRPGVKFHSGKAVDAAAVKAS
LERALKLNPSVKNALHIRDIHAEGQTLSITTDKPFPEFVSELVHPNTAIMDTTATGDFPS
GTGPFQVATFRAGSELNLERNEHYWNGEVKLKHAKFMFNEDANARQLAFQAKTADIVYRP
PIESLELLKADSTVKVDSLPSLRTHQLIYNMNNHDLKKTAVRKAFDHLINRDEIASGIMS
GQGTPAQGPFLPDFPFSPKYITKKFDLNAAREGFKKAGYTVQNGKVTNPDGSSLHLTLLT
YQSRAELPLISQLIQANAKELGITIDIRQVDNIDEYLAAHQDWDLATYSNITAPRGDASY
FLNAAYMPEGALNYGRVHIPELERMITQLNTTVNEEQRNKLALKAVTLIDQENLQSFLVH
PNNVVAYRNYVHNWVTSQSEYYLLTQDLDVN
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
ttgtttaaacgttcatatttcaaactatgtatccctgcggtaatggcggtgatgatgaca
gcctgtgcttcatctccatccactacatccacatcctctacggcaccacaagataagagt
gtcaccttattgttcaacgtgcaaagcccttctattgatcctcatacagatattaattac
acagccgttcgtgctggagtaaatgaaacactaatcaaagtgaataaggatctcaagctg
gaagcttggcttgcagagaaatgggatagtaaggacgggcgacactggacctttagcatc
cgaccaggcgtgaaattccatagcggtaaagccgtagatgcggcagctgtcaaagcctct
ctggaaagagcgctaaagctcaatccatcggtcaaaaatgcactacatatccgtgatatt
catgcagaagggcagaccttgagcattacgacggacaagcccttcccggaatttgtatct
gagctggttcatccgaataccgcaattatggacaccacagccacaggtgacttcccatcg
ggaacggggccgttccaggttgccactttccgtgccggaagtgaactgaatctggagcgc
aacgagcactattggaacggtgaagtaaagctgaaacatgccaagttcatgtttaacgaa
gacgccaatgcacgtcagcttgcatttcaagctaaaacagccgatattgtgtaccgtccg
cccattgaaagtctggaactcttgaaagctgattctaccgttaaagttgactctctcccc
agcctgcggacgcaccaacttatttacaatatgaacaatcatgatctgaaaaaaacagct
gtgcgcaaagcattcgatcatctgatcaaccgggatgagattgcgagcggtatcatgtct
ggtcagggaacccctgcgcaaggcccgttcttgccggactttcctttttcaccgaaatat
atcacgaaaaagtttgatctgaatgcggcacgagaaggcttcaaaaaggctggatataca
gtgcagaacggaaaagttacgaatcctgacgggtcctcccttcatcttacattgttaacc
taccagtcgagagcagagcttccactcatttcgcagctgattcaggctaacgctaaggag
cttggcattacgattgatatccgtcaggttgataatattgatgaatatctggccgctcat
caggattgggatttggcgacttacagtaacattacagccccgcgcggcgatgcaagctac
ttcctgaatgcggcctatatgccggagggagcattgaattacggtcgtgtgcatatacca
gaactcgagcgtatgattacacaactgaacacaactgtgaatgaggagcagcgcaacaag
ctggcgctgaaggctgtcacgctgattgaccaagaaaatctgcaatcctttctagttcat
ccaaacaacgtagtggcctatcgtaattacgtacataactgggtaaccagccaaagtgaa
tactatctgctgacccaggacttggatgtgaactag
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