Paenibacillus polymyxa SQR-21: PPSQR21_043550
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Entry
PPSQR21_043550 CDS
T03178
Symbol
cydC
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PPSQR21_043550 (cydC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppq02000
]
PPSQR21_043550 (cydC)
Transporters [BR:
ppq02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PPSQR21_043550 (cydC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
RsgA_GTPase
AAA_29
MMR_HSR1
SMC_N
ABC_ATPase
AAA_16
AAA_25
AAA_22
AAA_23
Zeta_toxin
DLIC
Motif
Other DBs
NCBI-ProteinID:
AHM67960
LinkDB
All DBs
Position
complement(4901913..4903715)
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AA seq
600 aa
AA seq
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MRATGDSSQGWFLLYLKQYFWAFLAAALLGALSIGCAGALLFTSGHLITRSALKPENILM
VYVPIVLVRTFGFSKAVIQYLERLVGHDAALRLVSRMRVRLYRAVEPQALMIRSKFRTGD
LLGLLAEDIEQLQNIYLKLVLPALSALLIYATGILALGWMDGTFALLMALYGGFLLFIAP
AISLWNSLAKRRTFKQERSKSYQELTDALFGMSDLVLSGRTGHFLSTFTQRHKRAAMVEN
SLRRNEWRSHWIAQCFVGGGIVIMTVWAGGLVAQGRIEATWLASFALVTFPLLDAFVRAG
EAVVHAPEYQDSLRRLKDSEKGTFALAARSYAGQPAADDVADTKKEQATAQRLSHGGDLL
LNNVSYRYAATQEWSVRNISLHVPQGGKVALLGRSGAGKSTLLNLIQGALQPDEGSVTVA
GVPVFTGGAYSSLFAVLNQQPYLFDTTVANNIRLGRPDATLDEVRAVTEQVGLGTLIDSL
PEGYDTRMQETGLRFSGGERQRIALARILLQNHPIVLLDEPTVGLDPLTEHELMQTMFRV
LEGKTLIWITHHLTGMKHMDEVIFMEQGTISMRGSHDELWRDHTRYRNLYKLDHPGPEKQ
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaacaggcgatagcagccaaggctggtttttgctttatctaaaacaatacttt
tgggcctttctggcagctgctcttttgggcgcgctgtccattgggtgtgcaggcgcgctg
ctctttacgtccggccatctgattactcgttcggccttaaagcctgaaaatatattaatg
gtgtatgtgcccattgtgcttgtgcgaacgtttggttttagtaaagccgttattcagtat
ctggaacgcttggtaggtcatgatgctgcgctgcggcttgtgtctcgtatgcgggtacgc
ttgtatcgggcagtggaaccgcaggcgctgatgattcgcagcaaatttcgtacaggggat
ctattgggattgctggcagaggatattgagcagcttcaaaatatctatctgaagctggtt
ctgcctgcgttatcggctttgctgatatatgcaacaggcatcttggcgcttggctggatg
gatggaacatttgccttgctgatggcgctatatgggggatttttgctttttatcgcccca
gctatctcactttggaactcactcgccaaacggcgtacgttcaagcaggaacggagtaaa
tcttatcaggaactgacggatgctttgttcggcatgagtgatctggtgctgagcggacga
actgggcatttccttagcacctttacacaacggcacaagagggctgccatggtggaaaat
tcacttcgccggaacgagtggcgttctcattggatcgcacaatgctttgtaggtggagga
attgtaattatgactgtgtgggccggaggactggtagcacagggtcgcattgaagcgaca
tggctggcatcctttgcgctagtaacttttccgttgctagatgctttcgttcgcgctggg
gaagcggtggttcatgcgccggagtatcaggattcacttcgacggctaaaggattccgag
aaaggtacatttgcacttgcagcacgatcatatgcaggacaaccagcagcagacgatgta
gcagatactaaaaaggaacaggctaccgctcagcgattaagccacgggggagaccttctg
cttaacaacgtaagctaccgctatgcggcaacgcaggaatggagtgtgcgtaatatctcc
ctacacgtaccacaggggggcaaggttgcattgcttggccgcagtggtgcgggtaagtct
acgctgctgaatctgattcaaggagcattgcagcctgatgaaggcagcgtcactgtcgca
ggagtgcctgtatttacaggtggagcatactccagtctatttgcggtgctaaaccagcaa
ccgtatttgttcgatacgacggtagcaaacaatattcgattgggacgacccgacgccacg
ctggatgaggttcgtgcagtgacggagcaggtagggcttggaaccctgattgattcttta
ccagagggttacgatacaagaatgcaggagacgggtcttcgcttttccggtggagaaaga
cagcgcattgcactggcgcggattttgttgcaaaatcacccaattgttttgctggatgag
ccgaccgtggggcttgatccgctgacggagcatgaacttatgcagacgatgtttcgcgtg
ctggaaggcaaaacattgatctggatcactcatcatctcacaggaatgaagcatatggat
gaggtgatctttatggaacaaggcaccatctccatgcgaggcagtcatgatgagctgtgg
cgagatcatacccgataccgtaatctgtataagctggatcatccgggtccggaaaaacag
taa
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