Paenibacillus polymyxa SQR-21: PPSQR21_045300
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Entry
PPSQR21_045300 CDS
T03178
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
PPSQR21_045300 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppq03011
]
PPSQR21_045300 (rpsC)
Ribosome [BR:
ppq03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
PPSQR21_045300 (rpsC)
Bacteria
PPSQR21_045300 (rpsC)
Archaea
PPSQR21_045300 (rpsC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KhpA-B_KH
FakA-like_M
DNA_pol3_a_NI
Motif
Other DBs
NCBI-ProteinID:
AHM68118
LinkDB
All DBs
Position
complement(5107101..5107766)
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AA seq
221 aa
AA seq
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MGQKVNPVGLRIGIIRDWESKWYAGKDFGDLLLEDVKIREHLKKRLKDSAVSRVEIERAA
NRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAESI
AQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLRA
DIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQEGGN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgggccaaaaggtaaatcccgtcggactccgaatcggtattatccgtgattgggaatcc
aaatggtatgcaggcaaagatttcggtgatcttttgctagaagacgttaagattcgtgag
catctgaagaaaagattgaaagactccgctgtatcccgtgttgaaatcgaaagagcagct
aaccgtgtcaacgtaacgattcacactgcgaaaccaggtatggttatcggtaagggtggt
tccgaagttgaaaatctgcgtaatgaaatcactaaaatcgcaggcggtaaaaaggtacac
atcaatatctctgaaattaaaaatcctgaactggatgcaattcttgttgctgaaagcatt
gcacaacaattggaacgtcgtgtttctttccgtcgtgcgttgaaacaagcaattcaaaga
actatgcgttccggtgcaaaaggaattaaaactcaagtaggcggacgtcttggcggtgcc
gaaatcgctcgttccgaaggatacagcgaaggaactgttccactgcatacgcttcgtgct
gacatcgactacggtacagcagaggctcatactacttatggccgtcttggcgtaaaagta
tggatctatcgtggagaggttcttcctccagctaagaaacaagctcctcaggaaggaggc
aactaa
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