KEGG   Paenibacillus polymyxa SQR-21: PPSQR21_045380Help
Entry
PPSQR21_045380    CDS       T03178                                 

Gene name
tufB
Definition
(GenBank) translation elongation factor tu
  KO
K02358  elongation factor Tu
Organism
ppq  Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:ppq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:ppq03012]
    PPSQR21_045380 (tufB)
   03029 Mitochondrial biogenesis [BR:ppq03029]
    PPSQR21_045380 (tufB)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppq04147]
    PPSQR21_045380 (tufB)
Translation factors [BR:ppq03012]
 Eukaryotic Type
  Elongation factors
   PPSQR21_045380 (tufB)
 Prokaryotic Type
   PPSQR21_045380 (tufB)
Mitochondrial biogenesis [BR:ppq03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    PPSQR21_045380 (tufB)
Exosome [BR:ppq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PPSQR21_045380 (tufB)
  Exosomal proteins of breast cancer cells
   PPSQR21_045380 (tufB)
  Exosomal proteins of colorectal cancer cells
   PPSQR21_045380 (tufB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 cobW RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID: AHM68126
LinkDB All DBs
Position
complement(5111604..5112794)
Genome map
AA seq 396 aa AA seqDB search
MAKAKFERNKPHVNIGTIGHVDHGKTTLTAAITTVLSKTYGGAAVAFDQIDKAPEERERG
ITISTAHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI
LLSRQVGVPYIVVFLNKCDMVEDEELLELVEMEVRDLLSEYDFPGDDTPITRGSAREALQ
NPDGDWAKKIVEMFETIDTYIPTPERDTDKPFLMPVEDVFSITGRGTVATGRVERGTVKV
GDEIEIIGIQEESRKSVVTGVEMFRKLLDSAQAGDNIGALLRGVDRAQIERGQVLAKPGS
VNPHTEFSAQIYVLTKEEGGRHKPFFTGYRPQFYFRTTDVTGIITLPEGSEMVMPGDNIT
VTVQLISPIAIEEGTKFSIREGGRTVGAGAVATISK
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
atggcaaaggctaagtttgaacgtaacaaaccgcacgttaatatcggtacaattggtcac
gtcgatcatggtaaaacaactttgactgctgcaatcacaactgtactttccaaaacttac
ggtggtgctgctgtagcattcgatcaaatcgataaagctccagaagagcgcgaacgcggt
atcacaatctccactgcacacgtggaatatgaaacacctaaccgtcactatgcacacgtt
gactgcccaggtcacgccgactatgttaaaaacatgatcactggcgctgcacaaatggac
ggagctattctggttgtatccgctgctgacggtcctatgccacaaactcgtgaacacatc
ctcttgtcccgtcaagtaggtgttccatacatcgttgtattcctgaacaaatgcgacatg
gttgaagacgaagagttgctggaattggttgaaatggaagttcgcgacttgctgagcgag
tatgacttcccaggcgacgacactccaatcactcgtggttccgctcgtgaagcactgcaa
aacccagatggcgactgggctaagaaaatcgttgaaatgttcgaaacaatcgacacatac
atcccaactccagaacgcgacactgacaagcctttccttatgcctgtcgaggacgtattc
tccatcactggtcgtggtacagttgctacaggccgtgtagagcgtggtacagttaaagtg
ggcgacgaaatcgaaatcatcggtattcaagaagaatcccgtaaatccgtagtaacaggc
gtagaaatgttccgtaaattgcttgactccgctcaagctggtgacaacatcggcgcactg
cttcgcggtgtagatcgtgcacaaatcgagcgtggccaagtattggctaagccaggttct
gttaacccacatacagaattctctgctcaaatctacgttttgactaaagaagaaggcgga
cgtcacaaacctttcttcactggttaccgtccacagttctacttccgtacaactgacgta
actggtatcattactttgccagaaggttccgaaatggtaatgcctggtgataacattacg
gttactgttcaactgatcagcccaattgcgattgaagaaggaactaagttctccattcgt
gaaggcggacgtacagttggtgcaggcgctgtagcaacaatctctaaataa

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