Paenibacillus polymyxa SQR-21: PPSQR21_051690
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Entry
PPSQR21_051690 CDS
T03178
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
ppq
Paenibacillus polymyxa SQR-21
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppq03016
]
PPSQR21_051690 (gidA)
03036 Chromosome and associated proteins [BR:
ppq03036
]
PPSQR21_051690 (gidA)
Transfer RNA biogenesis [BR:
ppq03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PPSQR21_051690 (gidA)
Prokaryotic type
PPSQR21_051690 (gidA)
Chromosome and associated proteins [BR:
ppq03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
PPSQR21_051690 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C
GIDA_C_1st
FAD_binding_2
Pyr_redox_2
FAD_oxidored
DAO
HI0933_like
AlaDh_PNT_C
Pyr_redox_3
Pyr_redox
ThiF
SidE_DUB
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AHM68751
LinkDB
All DBs
Position
complement(5821437..5823326)
Genome browser
AA seq
629 aa
AA seq
DB search
MGYQGGDYDVIIVGAGHAGVESALAAARMGCRTLMITINLDMVAFMPCNPSIGGPAKGHV
VREIDALGGEMGRNIDKTFIQMRMLNTGKGPAVHALRAQADKFSYQHAMKETMEKEPNLT
LRQGMVEELIIEDGQCVGVITKTGTEYRSKAVVLTTGTYLRGKIIMGELMYESGPNNQQP
SLRLSEHLRELGFDLVRFKTGTPPRVHKDTIDFSKTEIQPGDDQPKFFSYETKSSDNEQL
PCWLTYTSVETHQIINDNLHRAPMFSGLIEGTGPRYCPSIEDKVVRFSDKPKHQIFLEPE
GKNTSEYYVQGLSTSLPEDVQLAVLRTIPGMEKVEMMRNGYAIEYDAMVPTQLWPTLETK
KVPGLFTAGQINGTSGYEEAAGQGIMAGINAARKVQGKEPVVLDRSQGYIGVLIDDLVTK
GTNEPYRLLTSRAEYRLLLRHDNADLRLTPIGHDIGLITDERYERFLDKKQKVEQEIERL
RLAKVRPVDVNEMLEQGGSAPIQDGSNLLTVLRRPEISYAQVAQISPSPVALTEEEQEQV
EIQIKYAGYIEKQLMHVERLQKMEKKKLPEDISYNEVQGLAIEAKQKLEKIRPMSIGQAS
RISGVTPADISILLVYLEHYNRVTAARGS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggatatcaaggaggcgactatgatgtgatcatcgtcggtgcaggccatgcgggcgta
gaatccgccttggcagcggcacggatgggctgtcgtacattgatgatcacaattaacttg
gatatggtcgcattcatgccctgcaacccgtctattggtggtcccgcaaagggtcatgta
gtacgggaaattgatgcattgggtggcgaaatgggtcggaatatcgacaagacatttatc
caaatgagaatgttaaatactggtaagggtcctgctgtgcatgccttgcgcgcacaagca
gacaagttctcttatcagcatgcgatgaaggaaacgatggagaaagaaccgaatctgacc
ttacgtcaaggcatggttgaagagctgattatagaagacggccaatgcgtaggtgtgatt
acgaagacgggcacagagtatcgtagtaaggcagttgtcctgacgactggcacctacctg
cgcgggaaaatcattatgggtgagctgatgtatgagagtggcccgaacaatcagcagcct
tcgttgagactttctgaacatttgagagagcttgggtttgatctcgttcgctttaaaaca
gggacgccaccacgtgtgcataaggatacgattgattttagcaaaacagaaatacagcca
ggcgatgatcagccgaagttcttctcctatgaaacgaagtcctcggataatgagcagctg
ccttgctggctgacgtatacttcagtggaaacacatcagattattaatgataatttgcat
cgtgcaccgatgttctctggtctgatcgaaggaacgggaccacgttattgcccctctatt
gaagataaagtggtgcgtttcagtgataagccgaagcaccaaatctttttggagcctgag
ggtaaaaacacatctgaatactatgttcaaggcttgtcaacaagcttgccagaggatgtg
caattagcagtactgcgtaccattccagggatggaaaaggtagaaatgatgcgtaacggt
tacgctattgaatatgatgcgatggtacctactcagttgtggcctactttggaaacgaaa
aaagtacctggcttgttcacagcaggtcagattaacgggacatcgggttatgaagaagct
gcgggtcaaggaattatggctgggattaatgcagctcgcaaggtgcagggaaaggagccc
gtcgtactggatcgttctcaaggctacattggggttctgatcgacgatctggtgacaaag
ggtacaaatgagccctatcgtttgctgacatcgcgtgcagaataccgtctgttgttgcgg
catgataacgcggatctgcgattgactccgatcgggcatgatattggcctgattacagat
gaacgatatgagcgttttttggataaaaaacaaaaggtagagcaagagattgagcgtttg
cgcttagctaaagttcgtccggttgatgtaaatgagatgctggaacaaggcggatctgca
ccgatacaggacggcagtaatttgttaacagtactgcgtcggcctgaaatcagctatgca
caagtggcacaaatttcgccttcacctgtagctcttactgaggaagagcaagaacaggtg
gaaatccaaattaagtatgcgggctacattgaaaagcaattgatgcatgttgaacgtctg
caaaagatggagaagaagaagctcccagaggatatttcctacaacgaagttcagggcttg
gctattgaagctaagcagaagcttgagaaaatccgtccgatgtccattggtcaggcctcc
cgtatctccggtgtaactcctgcggatatttccattttgctggtttatctggagcactat
aaccgtgtaacggcagcgaggggatcataa
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