Photobacterium profundum: PBPRA1757
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Entry
PBPRA1757 CDS
T00173
Symbol
SF1802
Name
(GenBank) putative ATP-dependent helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
3.6.4.13
]
Organism
ppr
Photobacterium profundum
Brite
KEGG Orthology (KO) [BR:
ppr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
PBPRA1757 (SF1802)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
T2SSE
AAA_22
AAA_19
ABC_tran
nSTAND3
NACHT
ResIII
AAA_11
PhoH
NTPase_1
TsaE
Zeta_toxin
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CAG20164
UniProt:
Q6LRB2
LinkDB
All DBs
Position
1:2014911..2018825
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AA seq
1304 aa
AA seq
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MSLSNTPQSDVLNNEKTLKTAIKDCMIRDRFRLHKRVQGAARIKNEKAKHVVFDEIALDI
AKSMQTVELRRTNRPTIKYPELLPVSQRKDDIAEAIKHNQVVIVAGETGSGKTTQLPKIC
MELGRGTHGMIGHTQPRRLAARTVATRIAEEMECELGSYVGYKVRFNDQVSDRSQVKLMT
DGILLAEIQNDRFLSQYDTIIIDEAHERSLNIDFIMGYLRELLPKRPDLKVVITSATIDP
ERFSKHFNNAPIIEVSGRTYPVDTRYRPVSEDGDDSDRDQLQAIFDAVDELCDEGPGDIL
IFMNGEREIRDTADALEKRNLRNTEVLSLYARLSANEQNRVFQSHSGRRVVLSTNVAETS
LTVPGIKYVIDPGTARISRYSYRTKVQRLPIEAISQASANQRKGRCGRVQEGICVRLYSE
DDFLSRPEFTDPEILRTNLASVILQMTAIGLGDIHAFPFVEAPDNRNIQDGLRLLEELGA
INLKATDPRKRLSPMGRQLARLPLDPRLARMVLEAPKLGSLREVMVIACALSIQDPRERP
SEKKQASDEKHNRFADKDSDFIAFVNLWNYVQEQQKELSGNQFRKQCKKDYLNYLRIREW
QDIYYQVSQVVKELDLKINSQEASYDSIHQSLLAGMLSHIGIKDQEKNEYQGARNARFNI
FPGSGIFKKQPKWVMVAELVETSKLWGRIAAKIQPEWVEPLAQHLLKRSYSEPHWEKKQA
AVFAFEKIMMYGIPIVAKRKVNYGNIDAQVSREIFIRSALVEGDWETKHKFYHQNRRLLR
EVEELEHKSRRRDILIDDDELFEFYDQRVEHTVVSGRFFDSWWKKASKEDSSLLNFEREM
LFRGDASHITDLDYPNFWHQGNLKLKLSYQFEPGEDSDGVTVHVPLPILNQVEPDNFDWQ
IPGLRHELVVSLIKSLPKPIRRNFVPAPNYADAFLSRAEAMSMPLLDALEKELKRITGVT
ILREDWKAEQVPEHLKITYRVVDHKNRKLKENKDLYSLKDGLKEQVQETLSQVADDDIEQ
EGLKTWSFGALPECYQQKRGGFEVKAFPALVDNKDSVGIKLFETEEEQRMAMTQGQRRLV
LLNVPSPIKYLHSNLPNKSKLGLYFNPYGRVMDLIDDCIACGVDKLIQQKGGLIWEPEQF
AQTKEYVRAELGDTVVDVAQQVEAILTTAFSINKRLKGRVDLSMAFALSDIKAQIEGLIF
KGFATECGWQRLPDILRYMKAIERRMEKLPIDPNKDRVQILKIDSVMSDYKELLNKIPKG
QSVPEKVKEIRWMVEELRVSFFAQQLGTPYPVSDKRVRNAINDC
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
ttgagtctgtctaatactcctcaatcagacgttttgaataatgaaaaaacgctgaaaacc
gccattaaagattgcatgattcgcgatcgttttcgtttgcacaaacgtgtgcaaggtgcg
gcaagaattaagaatgaaaaagcaaagcacgttgtatttgatgaaattgcgctagatatt
gcgaaatcaatgcaaacggttgagctgcgtagaacgaatcgccctacgattaaataccca
gaattactgcctgttagccaaagaaaagatgacattgcagaagcaatcaaacacaaccaa
gtcgtgattgttgcgggtgaaacagggtcgggtaaaaccacgcagttaccaaagatctgt
atggaattaggccgtggcacccacggtatgattggtcatactcagcctcgtcgtcttgct
gcacgtactgttgcaacgcgtattgctgaagagatggagtgcgaattaggttcgtacgtt
ggttataaagttcgatttaatgaccaagtttctgatcgcagccaagtcaaattgatgaca
gacggtattttactggctgaaattcaaaatgaccgtttcttaagtcagtatgacaccata
attatcgatgaagcgcacgaacgtagccttaatatcgatttcattatgggctacttgcgc
gaattattgccaaaacgacctgatctaaaagttgtgattacatcggcaacaatcgatcct
gaacgtttttcaaagcacttcaataatgcacctatcattgaagtgtctggccgtacttat
ccagtagacactcgctaccgtcccgtgtcggaagacggtgatgatagcgatcgtgatcag
ctacaagctattttcgatgctgtcgatgagctatgcgatgaaggcccaggtgatatcttg
atcttcatgaacggtgaacgtgaaattcgtgatacggcggatgccctagaaaagcgtaat
ttgcgtaataccgaagtattgtctttgtacgcgcgtttatctgctaatgaacagaatcgt
gtattccaatcacacagtggtcgccgcgttgttttgtctactaacgtagcggaaacatcg
ttaacggtacctggcattaaatatgttatcgaccctggtactgcacgtattagccgatac
agctaccgcactaaagtacaacgtctaccgattgaagcgatttcacaagcaagtgctaat
cagcgtaaaggccgatgtggtcgtgttcaagaaggtatctgtgttcgtttgtattcagaa
gacgatttcttatctcgtcctgaatttaccgatcctgaaattctacgtaccaacttagca
tccgttatcttgcaaatgacggcaattggcttgggtgatattcacgcctttccgtttgta
gaagcgccagataatcgcaacattcaagatggtttacgcctacttgaagagttaggtgcg
attaatcttaaagcgacagatcctcgtaagcgtctatcgccaatggggcgtcagttagca
aggttaccgcttgatcctcgccttgcgcgtatggtgttagaagcccctaaactgggttca
ttgcgcgaagtgatggttattgcatgtgcattgtcgattcaagatccacgtgaaaggccg
tcagagaaaaaacaagcttctgacgaaaagcataatcgttttgcagataaagattctgat
ttcatcgcatttgttaatttatggaattatgttcaagagcagcaaaaagagctgtctgga
aatcaattccgaaaacaatgtaagaaagactatctgaactatttgcgcattcgtgaatgg
caagatatttactaccaagtgagtcaggtagtaaaagagctcgatttgaaaatcaatagc
caagaagcaagttacgacagcattcaccagtcattattggccggtatgctttctcatatt
ggtattaaagatcaggaaaagaacgaatatcaaggtgcacgaaatgcgcgctttaatatc
ttcccagggtctggcattttcaagaaacagcctaagtgggtgatggttgctgaattggtt
gaaacatccaagctgtgggggcgtattgccgctaaaattcagcctgagtgggttgaaccc
ttagcacagcatttgctgaaacgtagctatagcgaaccgcattgggaaaaaaaacaagcc
gctgtttttgcctttgaaaaaatcatgatgtacggcattcctattgttgctaagcgtaaa
gtgaattacggcaatattgatgcgcaagtatcgcgtgaaattttcattcgctcggcgtta
gttgaaggtgattgggaaacgaagcataagttttatcatcaaaaccgacgactattgcgc
gaagtggaagagttagaacacaaatctcgtcgtcgtgatattttgatcgatgatgacgag
ctatttgaattctacgatcaacgtgttgagcacaccgttgtatcgggtcgtttctttgat
agctggtggaagaaggcatcaaaagaagacagtagcctgcttaactttgaacgtgaaatg
ttgttcagaggcgacgctagccatattactgatttggattatccgaacttttggcatcaa
ggcaacttgaagctgaagctaagctaccagtttgagccaggtgaagatagtgacggtgta
acggtgcatgtgccattaccgatactgaaccaagtagaacccgataactttgattggcag
ataccgggtcttcgtcatgaattggttgtgtcattaattaaatcattacccaagccgatt
cgtcgcaactttgtgcctgcacctaattatgcagatgcttttctttcacgtgcagaagcg
atgtctatgccattgcttgatgcgttagagaaagaattaaagcgtattacgggtgttacg
atattgcgtgaagactggaaagccgagcaagttccagaacacttgaagattacgtaccgt
gtggttgatcacaagaaccgtaagctaaaagaaaataaagatttatacagtttaaaagat
ggcttgaaagagcaagttcaagaaacattgtcgcaagttgctgatgatgacattgaacaa
gaaggcttaaaaacatggagctttggcgcattacctgaatgctatcagcaaaaacggggt
ggctttgaggttaaagcattccctgcattggtagataacaaagactctgtgggtatcaag
ttatttgaaacggaagaagagcagcgaatggcaatgactcaaggtcagcgtcgtttagtt
ctgttgaacgtgccttcacccattaaatacttgcactcgaacttgccaaataaatcgaaa
ctgggtttatatttcaacccatacggtcgtgtgatggatcttatcgacgactgtattgcc
tgcggtgttgataagcttattcagcagaagggcggtttgatttgggaaccagagcaattt
gcacaaaccaaagaatacgttcgcgcagaacttggcgatacggttgttgatgtcgcgcag
caagtagaagctattttgacgacagcgtttagcattaacaagcgcttaaaaggtcgtgtt
gatttatcaatggcatttgcactgtctgatattaaggcacagattgaaggcttgatcttt
aaaggctttgcaacagaatgtggatggcagagattgcctgatattctgcggtacatgaag
gcgattgaacgtcgaatggaaaaactgcccatcgaccctaataaagatcgtgttcaaatc
ttgaagattgattcagtaatgagtgattacaaagagttactgaataaaattccgaaaggg
caatccgtaccagaaaaagtgaaagagatccgctggatggtcgaagaacttcgagtcagc
ttctttgctcagcaattgggtacgccttatcctgtttcagataagcgtgtacgcaatgcg
attaacgactgttaa
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