Pseudomonas protegens CHA0: PFLCHA0_c05670
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Entry
PFLCHA0_c05670 CDS
T02671
Symbol
orn
Name
(GenBank) oligoribonuclease Orn
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pprc03019
]
PFLCHA0_c05670 (orn)
03009 Ribosome biogenesis [BR:
pprc03009
]
PFLCHA0_c05670 (orn)
Messenger RNA biogenesis [BR:
pprc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PFLCHA0_c05670 (orn)
Ribosome biogenesis [BR:
pprc03009
]
Eukaryotic type
Pre-60S particles
RNases
PFLCHA0_c05670 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AGL82366
UniProt:
A0A2C9EFD6
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All DBs
Position
654559..655101
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AA seq
180 aa
AA seq
DB search
MQNPQNLIWIDLEMTGLNPDTDVIIEMATIVTDSNLNTLAEGPVIAIHQSDEILAGMDEW
NTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMK
ALESYFHYRNLDVSTLKELAARWAPDVRDSFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccgcagaacctgatttggatcgacctggaaatgaccggtctgaaccctgac
accgacgtcatcatcgagatggccaccattgtcactgacagcaacctcaacaccttggct
gaaggaccggtcatcgccatccaccagagcgacgagatcctcgccggcatggatgaatgg
aacacccgccagcacggcggttccggtctgacccagcgcgttcgcgaaagccgcatcagc
atggccgaagccgaagcccagaccattgccttcctggagcagtgggtacccaagggtaaa
tcgccgatctgtggcaacagcatctgccaggaccggcgcttcctgtaccgccacatgaag
gctctggaaagctacttccactaccgcaacctggacgtctcgaccctcaaggaactggcc
gcccgctgggcgccggacgtgcgcgacagcttcaagaaaggcagcacccacctggccctg
gacgatattcgcgagtccattgccgagctccagcactaccgcaagcacttcatcaagttc
tga
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