Pseudomonas protegens CHA0: PFLCHA0_c23890
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Entry
PFLCHA0_c23890 CDS
T02671
Symbol
ybhD1
Name
(GenBank) HTH-type transcriptional regulator YbhD
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c23890 (ybhD1)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFLCHA0_c23890 (ybhD1)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AGL84160
UniProt:
A0A2C9EKH9
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All DBs
Position
2634422..2635324
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AA seq
300 aa
AA seq
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MTVKQIRAFLAVAHSLSFALACERLHLSQSALSLTIKALEEGLGGRLFTRNTRNVALTPE
GEALLPLARRLIADWDNAEDELRQRFTLQRGRVTLAAMPSFAGNLLPPILKHFRARYPQV
NVTVNDVVNEQVLEMVRDREVELGVAFEPQDSTSLVFTPLYIDRFVAVVPRDSPLARRSE
IDWQALLQEPFITLQRPSTVRVMLEDHLRARGVQLPVEFESHQLATVGRMVASGLGVSAV
PALCAQQMRELGGHCLTLHDPVVERAIGVLTKPGDELSTAAQALFDILREENLGQRLALL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaaacagatacgggcatttctggccgtggcccacagtttgagctttgccctg
gcctgcgaacggctgcacctgtcgcagtcggccctgagcctgacgatcaaggcgctggag
gaaggcctgggtgggcgcctgttcacgcgcaatacgcgcaatgtggccctgaccccggaa
ggcgaggccctgctgcccctggcgcggcgtctgatcgccgactgggacaacgccgaggac
gaactgcgccagcgtttcaccctgcagcgaggccgggtgaccctggcggcgatgccgtcc
tttgccggcaacctgctgccgccgatcctcaagcactttcgggcccgctatccccaggtc
aacgtcacggtcaacgacgtggtcaacgagcaggtgctggagatggtccgtgatcgcgag
gtggagctgggggtggcgttcgagccccaggacagcacctcgctggtgttcaccccgctg
tacatcgaccgctttgtcgccgtggtgccccgggattcgcccctggcccggcgcagcgag
atcgactggcaggcgctgttgcaggagcccttcatcaccttgcagcggccgtccacggtg
cgggtgatgctcgaagatcacctgcgggcacggggcgtgcaactgccggtggagtttgaa
agccaccagttggcgaccgtggggcgcatggtcgccagcggcctgggggtgagtgcggtg
ccggcgctgtgcgcccagcagatgcgcgagctgggcgggcactgcctgaccctgcatgat
ccggtggtggagcgggccattggtgtactgaccaagccgggggacgagctgtccaccgcg
gcccaggcgctgttcgacatcctgcgcgaggaaaacctcggccagcgcctggcgctactc
tga
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