Pseudodesulfovibrio profundus: DPRO_0463
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Entry
DPRO_0463 CDS
T05258
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pprf
Pseudodesulfovibrio profundus
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprf03021
]
DPRO_0463
Transcription machinery [BR:
pprf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DPRO_0463
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_20
TrmB
HTH_8
HTH_28
Sigma70_r4_2
HTH_23
CENP-B_N
HTH_30
HTH_24
TetR_N
Sigma70_r4
UBact
HTH_5
MADF_DNA_bdg
HTH_Tnp_1_2
HTH_10
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
SOB57344
UniProt:
A0A2C8F4Q1
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All DBs
Position
DPRO:470064..470648
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AA seq
194 aa
AA seq
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MVSQNSYDGIDKYAADLIRHKARQLVGKAGFTEDDRPDLEQELMIDLLQRMRHFNPAKAK
KTTFMARIVERHISTILEARFAQCRDWRLCQTSLNEPLDNGEGDTNERIDFLDSEGSLGS
HPRMTRERVANEIRMDLDRAIASLPDELRDLCERLRDDTMAEIAREMGVPRTTLYDRLSK
LRDAFREAGLEDYL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggtttcacagaattcttacgacggcatcgacaagtatgccgccgacctcattcggcac
aaagcacgtcaactcgtaggcaaggccggattcaccgaggacgacagacccgacctcgaa
caggaactgatgatcgatctgctgcagcggatgcggcatttcaatcccgccaaggccaag
aagaccaccttcatggcccggatcgtcgaacgtcacatctccaccattctggaggcccgg
ttcgctcaatgccgggactggcgactctgccaaacctcactcaacgaacccctcgacaac
ggcgaaggcgataccaacgagcggatcgacttcctggacagcgagggctctctgggaagc
cacccaaggatgacccgggaacgggtcgccaatgaaatccgcatggatctcgaccgggcg
attgcctcattgccggatgagctacgggatctgtgcgaacgcctgcgcgacgacaccatg
gcagaaatcgcccgggagatgggcgttccccgcaccaccctctacgacaggctgagcaaa
ctccgtgacgcgttccgcgaggccggacttgaggactacctgtga
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