Pseudodesulfovibrio profundus: DPRO_2465
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Entry
DPRO_2465 CDS
T05258
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DPRO_2465 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_2465 (exoA)
Enzymes [BR:
pprf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DPRO_2465 (exoA)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DPRO_2465 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
SOB59373
UniProt:
A0A2C8FAA9
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All DBs
Position
DPRO:complement(2545386..2546153)
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AA seq
255 aa
AA seq
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MIIYSWNVNGYRAVLKKDFRDWLDSCGGDVVMLQETKAHPDQIDDDNRQPDSFSNAYWNW
SKKKKGYSGVACFTNPEPLEVNIGLPDPAYQDEGRVLHLEYPDFHLFNIYFPNGQMSDER
LEFKLGFYDCFLEHAEELRKTKPIVVGGDFNTAHKEIDLKNPKSNADRSGFLPIEREWLD
KFIDHGYVDTFRMFEDGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDKVVRAWIEPE
VMGSDHCPIGVEIDV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgatcatatattcctggaacgtaaacggctaccgggccgtactgaagaaagactttcgc
gactggctcgactcgtgcggtggcgatgtggtcatgctgcaggagaccaaggcgcacccg
gaccagatagatgacgacaatcgacagcccgattccttttccaatgcctactggaactgg
tccaagaagaaaaaaggctattccggtgtggcctgcttcactaatcccgaaccgctggaa
gtgaacatcggtctgcccgaccccgcctatcaggacgaaggccgcgtgctgcacctcgaa
taccccgacttccacctcttcaatatttatttccccaacggacagatgtcggacgaacgc
ctggagttcaagctcggcttctacgactgctttctggaacacgccgaggaactgcgcaag
accaagcccatcgtcgtgggcggcgatttcaatacggcccacaaggaaatcgacctcaag
aaccccaagtccaatgcggatcgttccgggttcctgcccattgagcgggagtggctcgac
aagttcatcgaccatggctacgtggacaccttccgcatgttcgaggatggcccgcaccac
tattcatggtggtcgtaccgcttcaacgcccgcaagaacaacgcggggtggcgtatcgac
tactttttcgtatccgaagaactcaaggacaaggttgtcagggcatggatcgagccggag
gtcatggggtcggaccactgccccatcggagtggagatcgacgtttag
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