KEGG   Pseudodesulfovibrio profundus: DPRO_3905Help
Entry
DPRO_3905         CDS       T05258                                 

Gene name
gatA
Definition
(GenBank) Glutamyl-tRNA(Gln) amidotransferase subunit A
  KO
K02433  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Organism
pprf  Pseudodesulfovibrio profundus
Pathway
pprf00970  Aminoacyl-tRNA biosynthesis
pprf01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pprf00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DPRO_3905 (gatA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:pprf03029]
    DPRO_3905 (gatA)
Enzymes [BR:pprf01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     DPRO_3905 (gatA)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     DPRO_3905 (gatA)
Mitochondrial biogenesis [BR:pprf03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    DPRO_3905 (gatA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Amidase
Motif
Other DBs
NCBI-ProteinID: SOB60824
UniProt: A0A2C8FEC8
LinkDB All DBs
Position
DPRO:4059841..4061298
Genome map
AA seq 485 aa AA seqDB search
MSELFEKSLGEIAGLLQSGEVKAVDAVTSCIERIEATEPRVQALLTVMKDEALQQAEAMD
AEGPDAEKALWGVPIVLKDLLAAKGTKTTCASKILENFVPFYDATAVTKLREAGAIIIGK
ANMDEFAMGSSTENSAYMKTLNPWDLDRVPGGSSGGSGATVAAGQCYAALGTDTGGSIRL
PASFCGIVGLKPTYGRISRFGLIAYGSSLDQIGPMTRNVEDSARLLQVMAGHDPKDSTSV
DVPVPDYLAALGRESLEGVTIGLPEEYWGEGLDEEVEQACRDAVKKMEELGAKTVPVKLA
LTDYAIATYYIIAMAEASSNLSRFDGVRFGHRNMEAEELIDMYTSSRTEGFGDEVQRRII
IGTYVLSSGYYDAYYNKAAKVRRLLREDFEKAFEQCDIIAGPVCPTTAFKAGEKADPLQM
YLMDIFTISCNLAGLPGMSLPVGLGKDSEMPVGLQFMGPAFSEDVMLSVAECLERNIDPM
PMPKL
NT seq 1458 nt NT seq  +upstreamnt  +downstreamnt
atgtcagaattgtttgaaaaaagtttaggcgagatcgccggacttcttcagtccggcgaa
gtgaaagccgttgatgccgtcaccagctgcattgagcgtatcgaggccaccgaaccccgt
gttcaggcgctgcttacggtgatgaaggatgaagccctgcaacaggccgaagccatggat
gccgaagggcctgatgccgagaaggcgttgtggggtgtgcctattgtccttaaggacttg
ctcgccgctaaaggcaccaagaccacctgcgcttccaagattcttgaaaattttgtcccg
ttttatgatgccacggcagtaaccaagctccgcgaagctggcgccattatcattggtaaa
gccaacatggatgagttcgccatgggatcatccactgagaactcggcttatatgaagacg
ttgaatccgtgggatctggatcgggttcctggtggttcttccggtggttccggcgcaacc
gtcgcagcagggcagtgctatgcagcccttggcacggatactggcggctccattcgtttg
cctgcttctttctgcggtatcgttggcctgaagccgacctatgggcgtatttcccgtttc
ggcctgattgcctacggttcctcactggatcagatcggtcccatgacgcgcaacgtcgag
gattccgctcgtcttttgcaggtcatggccggacacgatcccaaggattccacttccgtt
gatgtgcctgtgccggactatctggctgcactgggcagggaatcccttgagggcgtgacc
attggtctgcccgaagagtactggggtgaaggattggatgaagaagttgagcaggcttgc
agggatgccgtcaagaagatggaggaactgggagccaagaccgtgccggtcaagctcgct
ttgaccgattacgccatcgccacctactacatcattgccatggccgaagcttcctccaac
ctgtcccgtttcgatggcgttcgtttcggacaccgcaacatggaagccgaggagttgatc
gacatgtatacctccagccgtactgaagggttcggcgatgaggtgcagcgacggatcatc
atcggcacatatgttctttcttccggttactacgatgcctactacaacaaggcagccaag
gtgcggcgtcttctgcgcgaagactttgaaaaggcgtttgagcagtgcgatatcattgcg
ggtcctgtttgccccaccacggctttcaaggccggtgaaaaggctgatccgctccagatg
tacctgatggatattttcaccatctcctgcaaccttgctggcctgccgggcatgagtctg
ccggttggattgggcaaggattccgagatgcctgttggccttcaattcatggggccggcc
tttagtgaagatgtcatgctctccgtggccgagtgccttgagcgcaacatcgaccccatg
cccatgccgaaactctag

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