Pseudomonas protegens Cab57: PPC_0316
Help
Entry
PPC_0316 CDS
T03613
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00521
Streptomycin biosynthesis
ppro00523
Polyketide sugar unit biosynthesis
ppro00541
O-Antigen nucleotide sugar biosynthesis
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01250
Biosynthesis of nucleotide sugars
Module
ppro_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PPC_0316
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PPC_0316
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PPC_0316
Enzymes [BR:
ppro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PPC_0316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BAO59663
LinkDB
All DBs
Position
complement(352909..353454)
Genome browser
AA seq
181 aa
AA seq
DB search
MNIIQTELTGVLIIEPKVFGDERGFFYESFNAKAFEEATGLQKSFVQDNHSRSVKNVLRG
LHYQIEHPQGKLVRVIAGEVLDVAVDIRRSSPNFGRWASVRLSAHNNRQLWIPEGFAHGF
VVLSDAAEFLYKTTDYYTPSAERCISWDDPTLAIDWQLQDMPTLSAKDQKGKSLEEADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattcagacagagctcaccggtgtactgattatcgagcccaaggtctttggc
gacgagcgtggtttcttctacgagagcttcaatgccaaggcctttgaagaggccaccggc
ttgcagaagagctttgtacaggacaatcactcgcgatccgtcaagaacgtcctgcgtggt
ctgcactaccagattgagcacccgcagggaaaactggtccgggtgattgccggcgaggtt
ctggacgtagccgtcgatatccggcgcagctccccgaactttggccgttgggcaagtgtt
cgcctgtctgcacataacaatcgccaactatggattcccgaagggttcgcccatggcttc
gtagtactcagcgacgctgccgagtttctctacaagaccaccgattactacacgccttct
gctgagcgttgcatcagttgggacgatccgaccctggcgatcgactggcagttgcaggat
atgccaacgctctcggccaaggaccagaaaggtaaaagccttgaagaagccgatctgttc
ccatga
DBGET
integrated database retrieval system