Pseudomonas protegens Cab57: PPC_2088
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Entry
PPC_2088 CDS
T03613
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppro03016
]
PPC_2088 (truA)
Enzymes [BR:
ppro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PPC_2088 (truA)
Transfer RNA biogenesis [BR:
ppro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPC_2088 (truA)
Prokaryotic type
PPC_2088 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAO61435
LinkDB
All DBs
Position
2306339..2307193
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AA seq
284 aa
AA seq
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MANIDNPAAEMAAEGFSRIALGVEYKGSRYRGWQRQASGVPSVQETLEKALSRVADSPVV
VSCAGRTDAGVHACGQVVHFDTQAVRSMKAWVMGANINLPHDISVSWAKEMPAHFHARFK
AIARRYRYVIYNDQIRPAHLNEEITWNHRPLDIERMAQAAAFLVGTHDFSAFRAGQCQAK
SPIKEIHHLRVTRHGKMIVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWAREVLESRI
RRTGGVTAHPFGLYLVQVEYKDEFQLPERYIGPHFLSGFSELDG
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatatagataacccggccgccgaaatggcagccgaaggcttttcccgaatcgct
ctgggtgtggaatacaagggctcgcgctaccgcggctggcagcgtcaggcctccggtgtg
cccagtgtccaggaaaccctggagaaggccctgtcccgggtcgcggattctccagtggtg
gtgtcttgtgccggacgcaccgatgccggggtgcatgcctgcgggcaggtggtgcatttc
gatactcaggccgtgcgttcgatgaaggcctgggtgatgggggccaatatcaatttgccc
cacgacatcagcgtcagctgggccaaggagatgcccgcgcattttcacgcacggttcaag
gcgatcgcccggcgttaccgttatgtgatctacaacgatcagatccgtccagcccatctc
aacgaagaaatcacctggaaccaccggccgctggatatcgagcgcatggcccaggctgcc
gcgttcctggtgggcacccatgatttcagcgcgttccgggccgggcagtgccaggccaag
tcgccgatcaaggagatccatcaccttcgggtcactcggcacggcaagatgatcgtcctg
gatattcgtgccagcgccttcctgcatcacatggtgcgcaacatcgccggggtgctgatg
accatcggtgccggcgagcggccggtggagtgggcgcgagaagtgctggaaagccggatc
cggcgtaccggcggcgtcaccgcccatccttttggcctgtacctggtgcaggtcgaatac
aaggacgagttccagttgcccgagcgatacatcgggccacatttcctcagcggattctcg
gaacttgacggctga
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