Pseudomonas protegens Cab57: PPC_5820
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Entry
PPC_5820 CDS
T03613
Name
(GenBank) methyltransferase small domain-containing protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
ppro
Pseudomonas protegens Cab57
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppro03009
]
PPC_5820
Enzymes [BR:
ppro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
PPC_5820
Ribosome biogenesis [BR:
ppro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PPC_5820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_15
Met_10
Methyltransf_25
FtsJ
UPF0020
PrmA
Methyltr_RsmB-F
Methyltransf_24
Spermine_synth
TRM
Anamorsin_N
Motif
Other DBs
NCBI-ProteinID:
BAO65167
LinkDB
All DBs
Position
6432117..6433313
Genome browser
AA seq
398 aa
AA seq
DB search
MSLPSLRLKANADRRLRAGHLWVYSNEIDVAATPLHGFKAGDQAVLEAAGGKPLGVVAMS
PNNLICARLLSRDAKLALDKSLLVHRLNVALSLRERLFDKPFYRLVYGDSDLLPGLVVDR
FGDILVVQIASATMETHKDDIIAALTQVLKPSGILFKNDSAARDAEGLGRYVETVFGLVP
EWVALEENGVKFEAPVIQGQKTGWFYDHRMNRARLAPYAKGKRVLDLYSYIGGWGVQAAA
FGASEVFCVDASAFALDGVERNAALNGFAEKMTCIEGDVFEALKELKASEERFDVIVADP
PAFIKRKKDLKNGEGAYRRLNEQAMRLLNKDGILVSASCSMHLPEDDLQNILLTSARHLD
RNIQLLERGGQGPDHPVHPAIPETRYIKSITCRLLPNS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgccaagcctgcgcctcaaagccaacgccgatcgccgcctgcgcgccggccac
ctgtgggtctacagcaacgaaatcgatgtagccgccacccctctgcacggcttcaaggca
ggcgaccaggcagtgctggaagccgccggcggcaagcccctgggcgtggtcgccatgagc
ccgaacaacctgatctgcgcccgcctgctgtcgcgcgatgccaagctggccctggacaag
tcgctgctggtgcaccgcctgaacgtggccctgtccctgcgcgagcgcctgttcgacaaa
ccgttctaccgcctggtgtacggcgactccgacctgctgccgggcctggtggtcgatcgt
ttcggcgacatcctggtggtacagatcgcctccgcgaccatggaaacccacaaggacgac
atcattgccgccctgacccaggtgctcaagcccagcggcatcctgttcaagaacgactcc
gccgcccgtgacgccgaaggcctgggacgctacgtcgaaaccgtgttcggcctggtgccg
gagtgggtcgccctggaagagaacggcgtgaagttcgaagccccggtgatccagggccag
aaaaccggctggttctacgaccaccgcatgaaccgtgcccgcctggcgccttatgccaag
ggcaagcgcgtgctggacctgtacagctacatcggcggctggggcgtgcaggccgcggct
ttcggcgccagcgaagtgttctgcgtcgacgcctcggccttcgccctcgacggcgtggag
cgcaacgccgcgctgaacggctttgccgagaaaatgacctgcatcgaaggcgacgtcttc
gaagccctgaaggaactcaaggccagcgaagagcgcttcgacgtgatcgttgccgacccg
cccgccttcatcaagcgcaagaaagacctgaagaacggcgaaggcgcctaccgccgcctt
aacgagcaagccatgcgcctgctcaacaaggacggcatcctggtcagcgcgtcgtgctcg
atgcacctgcccgaggacgacctgcagaacatcctcctgaccagcgcccgccacctggac
cgcaacatccagctgctggagcgcggcggccagggcccggaccacccggtgcacccggcc
attccggaaacccgctacatcaagagcatcacctgccgcctgctgcccaacagctga
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