Paroceanicella profunda: FDP22_05115
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Entry
FDP22_05115 CDS
T06319
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ppru
Paroceanicella profunda
Pathway
ppru03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FDP22_05115 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_05115 (mutS)
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FDP22_05115 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QDL91213
UniProt:
A0A5B8FYH4
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Position
complement(1132273..1134939)
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AA seq
888 aa
AA seq
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MDDSTPDAPAAAVTPMMAQYLDLKGQYPDALLFYRMGDFYEMFFDDARAAAAALDIALTK
RGKHAGDDIPMCGVPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGAKSVVRRDVVR
LVTPGTLTEDTLLDARRHNYLAAWAEIRGEGALAWLDVSTGDFAATACPRPLLGPMLARL
APRELLCAQGADAPLREMVEESGGVLTELAGASFDSQSAEHRLKGLYAVSTLEAFGGFGR
AEIAALGAVVDYVEVTQKGKLPMIRPPQHEEAGGTMQIDAATRRNLEITRSLSGGREGAL
LQAVDRTVTGAGARLLEARLSSPSTDLDTIRARHDAVAHLIENRPRADALRARLRGVPDM
ERALTRLSLERGGPRDLAALRDGLAEGAGIAALLTGALPDALAEAAAALSGLEDITAPLE
AALVAEPPLLARDGGFIAAGHHADLDEVRRLRDEGRGVIASLQAGYAEATGIPSLKIKHN
NVLGYFIETTATHAEKMRRPPQSETFIHRQTTANQVRFTTVELSGLETRILNAGGRALEL
ERQLFEGLAAGVRACAARIAAAARALAGIDLACGFADLADAEDWVRPVMQAGGAFRIEGG
RHPVVEQALRRAGDKPFVANDCDLTLGEKPVWLVTGPNMAGKSTFLRQNALIALLAQAGA
FVPARAATIGIVTQLFSRVGAADDLARGRSTFMVEMVETAAILNQAGPGALVILDEIGRG
TATWDGLSIAWATLEHLHDANRCRTLFATHYHELTTLTARLSGLLNAAVTVREWQGDVIF
LHEVRPGAADRSYGVQVARLAGLPAAVIDRARHVLETLEEGDRAGGARAATLIDDLPLFS
VRPPAPAPARAAPSAVEARLREVLPDTLSPRDALDLIYELRDLLGPDT
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacgactccacacctgacgccccggccgccgccgtgaccccgatgatggcccagtac
ctggacctgaagggccagtacccggacgcgctgctgttctaccggatgggcgatttctac
gagatgttcttcgacgacgcccgcgcggcggcggcggcgctggacatcgccctcaccaaa
cgcggcaagcacgccggagacgacattcccatgtgcggcgtgccggtgcacgcggcggaa
ggctacctgctcaccctcatccgcaagggcttccgcgtcgcggtctgcgagcagatggag
gacccggcggaggcgaagaagcgcggcgcgaaatccgtggtcaggcgcgacgtggtgcgg
ctcgtcacccccggcaccctcaccgaggacacgctgctggacgcgcggcggcacaattac
ctcgccgcctgggcggagatccgcggcgagggggcgctggcctggctcgacgtctccacc
ggcgatttcgccgccaccgcctgcccgcgcccgctgctggggccgatgctggcccggctc
gccccgcgcgagctgctctgcgcccagggggccgatgcgccgttgcgcgagatggtggag
gagagcggcggcgtgctcaccgagctggccggcgccagcttcgacagccagtccgccgag
caccggctgaaggggctctacgccgtctccacgctggaggccttcggcgggttcggccgg
gcggagatcgcggcgctgggcgcggtggtggattacgtggaggtgacccagaagggcaag
ctcccgatgatccgcccgccgcagcacgaggaagccggcggcacgatgcagatcgacgcc
gccacccgccgcaacctggaaatcacccgcagcctgtccggcggccgcgagggcgcgctg
ctgcaggcggtggaccgcacggtgaccggcgccggcgcgcggctgctggaggcccggctc
tccagcccctcgaccgacctcgacaccatccgcgcccgccatgacgcggtggcgcatctc
atcgagaaccgcccgcgcgccgacgccctgcgcgcccggctgcgcggcgtgccggacatg
gagcgcgccctcacccggctgagcctggagcgcggtggcccgcgcgacctcgccgccctg
cgcgacgggctggccgagggcgccggcatcgccgccctgctcaccggtgcgctgccggac
gcgctcgccgaggccgccgccgccctcagcgggctggaggacatcaccgcgccgctggag
gccgcgctggtggccgaaccgccgctgctggcgcgcgacggcggcttcatcgccgccggc
caccatgcggatctggacgaggtgcgccgcctgcgcgacgagggccgcggcgtgatcgcc
tcgctgcaggccggctatgccgaggccaccggcatcccctcgctgaagatcaagcacaac
aacgtgctgggctatttcatcgagaccaccgccacccacgcggagaagatgcgcaggccg
ccgcagtccgagaccttcatccaccggcagaccacggcgaaccaggtgcgcttcaccacg
gtggagctttccggcctggaaacccgcatcctgaacgccggcgggcgggcgctggagctg
gagcgacagctgttcgaggggctggcagccggggtgcgcgcctgcgcggcccgcatcgcc
gccgccgcgcgggcgctggcgggcatcgacctggcctgcggcttcgccgatctggccgac
gcggaggactgggtgcgcccggtgatgcaggccggcggcgccttccgcatcgagggcggc
cgccacccggtggtggaacaggcgctgcgccgggccggcgacaagcccttcgtggccaat
gactgcgacctgacgctgggcgagaagccggtctggctggtgaccgggccgaacatggcc
ggcaaatccaccttcctgcgccagaacgcgctcatcgcgctgctggcgcaggccggggcc
ttcgttccggcgcgcgcggcgacgataggcatcgtcacccagctgttctcgcgcgtgggc
gcggcggacgacctggcccgcggccgctccaccttcatggtggagatggtcgaaaccgcg
gcgatcctgaaccaggccggccccggcgcgctggtgatcctcgacgagatcggccgtggc
accgccacctgggacgggctgtccatcgcctgggccacactggagcacctgcatgacgcg
aaccgctgccgcacgctgtttgccacgcattatcatgaacttaccacgctcacggcccgg
ctttccggcctgctgaacgccgccgtcacggtgcgtgagtggcagggagacgtgatcttc
ctgcacgaggtgcgccccggcgccgccgaccgctcctacggggtgcaggtggcccggctg
gccgggctgccggccgcggtgatcgaccgcgcgcgccacgttctggaaaccctggaggag
ggtgaccgcgcgggcggggcgcgggccgcgacgctgatcgacgacctgccgctgttctcc
gtccggccgccggcgccggccccggccagggccgcgccctcggcggtggaagcccggctg
cgcgaggtgctgccggacacgctctcgccccgggacgcgctcgacctcatctacgaattg
cgcgacctgctcggccccgatacctga
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