Paroceanicella profunda: FDP22_22415
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Entry
FDP22_22415 CDS
T06319
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_22415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_22415
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FDP22_22415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
oligo_HPY
AAA_22
SMC_N
AAA_16
AAA_29
AAA_5
nSTAND3
MobB
NACHT
TsaE
AAA_33
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QDL94628
UniProt:
A0A5B8FJQ7
LinkDB
All DBs
Position
pD4M1C:121722..123371
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AA seq
549 aa
AA seq
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MTAPLVDIRGLTLTFGGDSATPVLHGVDLQVARGEILGVIGESGSGKTMTGMALLRLLPG
TATVAAEAMTFDGIALPGLDELQFGALRGVRLAMVFQDPVGAFNPSKRVGWHFHHILRRR
GETRRAANRARAVSLLGEVGIRRPEETFDLYPHQLSGGMLQRALIALVLALEPDLVVADE
PTSNLDKLVEHQILTLFREMQQRLRAGMIFVTHDMAVAAALCDRIAVMRQGVVVETGTAG
QIFAAPQHAYTRLLIDTARRLSEGPAKRAQPEPEAGSVPLMRVSGLDVTFPSAGGRGAFR
ALDGITLDIRRGEVLGLVGESGSGKTTLGRTLLRLLEPSAGSLLYKGRDIAHTPEARLRG
IRRELQMVFQDPGGSFNPRKPMHASLADALRATGLRDRAAIASRISGLMQRVGLTDRHAA
RYPHELSGGQLQRVAIARALALEPELIVADEPVSKLDVSVRAGVLDLFRDIQAETGLAMV
FITHDLEVARYLCDRIGVLRHGRLLELGPTGRIFADPQHTYTKTLLATLDYTMSGKHFGA
GGYGPDGRA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccccctcgtggacatccgcggcctcaccctcaccttcggcggcgacagcgca
accccggtgctgcacggcgtggacctgcaggtggcgcgcggcgagatcctcggcgtgatc
ggggaatcgggctcgggcaagacgatgaccggcatggcgctgctgcgcctgctgcccggc
accgcgacagtggccgccgaggcgatgaccttcgacggcatcgcgctgcccgggctggat
gagctgcagttcggcgccctgcgcggggtccggctcgccatggtgttccaggacccggtg
ggggccttcaacccctcgaagcgcgtcggctggcacttccaccacatcctgcgccggcgg
ggagagacgcggcgcgcggccaaccgcgcccgcgccgtgtccctgcttggcgaggtgggc
atccggcgcccggaggagaccttcgacctctacccgcaccagctctccggcggcatgttg
cagcgcgccctgatcgcgctggtgctggcgctggagccggatctcgtggtggccgacgag
cccacctccaacctcgacaagctggtcgagcaccagatcctcacgctgtttcgcgagatg
cagcagcggcttcgcgccggcatgatcttcgtcacccatgacatggcggtggccgccgcg
ctgtgtgaccggatcgcggtgatgcggcagggcgtcgtggtggagaccggcacggcgggg
cagatcttcgccgcgccgcagcacgcctacacccggttgctgatcgacaccgcccgcagg
ctctcggagggcccggcgaagcgcgcacagccggagccggaggccggctccgtgccgctg
atgcgtgtcagcgggctcgacgtcaccttcccctccgcgggcgggcgcggggccttccgg
gcgctcgacggcatcaccctcgacatccgccgcggcgaggtgctgggcctggtcggggaa
agcggttcgggcaagaccacgctgggccgcaccctgctgcggcttctggaaccctccgcc
ggcagcctgctctacaaggggcgggacatcgcccacacccccgaggcgcgcctgcgcggc
atccgccgcgagctgcagatggtgttccaggaccccggcggctccttcaacccgcgcaag
ccgatgcacgcctcgctcgccgatgcgctgagggccacgggcctgcgcgaccgggcggcc
atcgccagccgcatctccgggctgatgcagcgcgtcggcctcaccgaccggcacgccgcc
cgctatccgcatgagctctccggcggccagctccagcgcgtcgccatcgcccgggccctg
gcgctggagccggagctgatcgtggcggacgagccggtgtccaagctcgacgtctcggtg
cgcgccggggtgctcgacctgttccgcgacatccaggccgaaaccgggctggccatggtg
ttcatcacccatgatctggaggtcgcgcgctacctgtgtgaccgcatcggcgtgctccgc
cacggcaggctgctcgaacttggccccaccgggcgcatcttcgcggacccgcagcacacc
tacacgaaaaccctgctcgccacgctcgattacaccatgagcggcaagcacttcggcgcc
ggcggctacgggcctgacggccgcgcctga
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