Pan paniscus (bonobo): 100976964
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Entry
100976964 CDS
T02283
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
pps
Pan paniscus (bonobo)
Pathway
pps03250
Viral life cycle - HIV-1
pps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pps00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100976964 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100976964 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pps04131
]
100976964 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pps04147
]
100976964 (PDCD6IP)
Membrane trafficking [BR:
pps04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
100976964 (PDCD6IP)
Exosome [BR:
pps04147
]
Exosomal proteins
Proteins found in most exosomes
100976964 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Ly49
AAT
DUF5082
TINF2_N
Motif
Other DBs
NCBI-GeneID:
100976964
NCBI-ProteinID:
XP_034811985
Ensembl:
ENSPPAG00000029413
LinkDB
All DBs
Position
3:33719603..33793301
Genome browser
AA seq
873 aa
AA seq
DB search
MATFISVQLKKTSEVDLAKPLVKFIQQTYPSGGEEQAQYCRAAEELSKLRRAAVGRPLDK
HEGALETLLRYYDQICSIEPKFPFSENQICLTFTWKDAFDKGSLFGGSVKLALASLGYEK
SCVLFNCAALASQIAAEQNLDNDEGLKIAAKHYQFASGAFLHIKETVLSALSREPTVDIS
PDTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYFGDAFKQCQYKDTLPKY
FYFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYV
NVKDFSDKINRALTAAKKDNDFIYHDRVPDLKDLDPIGKATLVKSTPVNVPISQKFTDLF
EKMVPVSVQQSLAAYNQRKADLVNRSIAQMREATTLANGVLASLNLPAAIEDVSGDTVPQ
SILTKSRSVIEQGGIQTVDQLIKELPELLQRNREILDESLRLLDEEEATDNDLRAKFKER
WQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIP
SANPAKTMQGSEVVNVLKSLLSNLDEVKKEREGLENDLKSVNFDMTSKFLTALAQDGVIN
EEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKN
LATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIAR
EPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTMPPTKPQPPARPPPPVLPANRAPSATAPS
PVGAGTAAPAPSQTPGSAPPPQAQGPPYPTYPGYPGYCQMPMPMGYNPYAYGQYNMPYPP
VYHQSPGQAPYPGPQQPSYPFPQPPQQSYYPQQ
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggcgacattcatctcggtgcagctgaaaaagacctcagaggtggacctggccaagccg
ctggtgaagttcatccagcagacttacccgagcggcggggaagagcaggcccagtactgc
cgcgcggcggaggagctcagcaagctgcgccgcgccgcagtcggtcgcccgctggacaag
cacgagggcgcgctcgagacgctcctgagatattatgatcagatttgttctattgaaccc
aaattcccattttctgaaaatcagatctgcttgacatttacctggaaggatgctttcgat
aaaggttcactttttggaggctctgtaaaactggctcttgcaagcttaggatatgaaaag
agctgtgtgttgttcaattgtgcagccttagctagccaaattgcagcagaacagaacctg
gataatgatgaaggattgaaaatcgctgctaagcattaccagtttgctagtggtgccttt
ttacatattaaagagacggttttatctgccttaagtcgagagccgaccgtggacatatct
ccagatactgttgggaccctcagtcttattatgctggcacaggctcaagaagtatttttt
ttaaaagccacaagagataaaatgaaagatgccatcatagctaaattggctaatcaggct
gcagattattttggtgatgctttcaaacagtgtcaatacaaagatactctccccaagtat
ttttatttccaggaggtgttccctgtcttggctgcaaagcactgtatcatgcaggccaat
gctgagtaccatcagtctatcctggcaaaacagcagaagaaatttggagaagaaattgca
aggttacagcatgcagcagaactgattaaaacagtggcatctcgctatgatgaatatgtt
aatgtgaaggatttttctgacaaaatcaatcgtgcccttactgcagcaaagaaggataat
gacttcatttatcatgatcgagttccagaccttaaagatctagatcctattggcaaagcc
acacttgtgaaatctaccccagtcaatgtacccatcagtcagaaatttactgatctgttt
gagaagatggttcctgtgtcagtacagcagtctttggctgcctataatcagaggaaagcc
gatttggttaacagatcaattgctcagatgagagaagccaccactttggcaaatggggtg
ctagcttcccttaatcttccagcagcaattgaagatgtgtctggagacactgtacctcag
tctatattgactaaatccagatctgtgattgaacagggaggcatccagactgttgatcag
ttgattaaagaactgcctgaattactgcaacgaaatagagaaatcctagatgagtcatta
aggttgttggatgaagaagaagcaaccgataatgatttaagagcaaaatttaaggaacgt
tggcaaaggacaccatccaatgaactgtataagcctttaagagcagagggaaccaacttc
agaacagttttagataaagctgtgcaggcagatggacaagtgaaagaatgttaccagtct
catcgtgacaccatcgtgcttttgtgtaagccagagcctgagctgaatgctgccatccct
tctgctaatccagcaaagaccatgcagggcagtgaggttgtaaatgtcttaaaatcctta
ttgtcaaatcttgatgaagtaaagaaggaaagagagggtctggagaatgacttgaaatct
gtgaattttgacatgacaagcaagtttttgacagccctggctcaagatggtgtgataaat
gaagaagctctttctgttactgaactagatcgagtctatggaggtcttacaactaaagtc
caagaatctctaaagaaacaggagggacttcttaaaaatattcaggtctcacatcaggaa
ttttcgaaaatgaaacaatctaataatgaagctaacttaagagaagaagttttgaagaat
ttagctactgcatatgacaactttgttgaacttgtagctaatttgaaggaaggcacaaag
ttttacaatgagttgactgaaatcctggtcaggttccagaacaaatgcagtgatatagtt
tttgcacggaagacagaaagagatgaactcttaaaggacttgcaacaaagcattgccaga
gaacctagtgctccttcaattcctacacctgcatatcagtcctcaccagcaggaggacat
gcaccaactcctccaactccagcgccaagaaccatgccgcctactaagccccagccccca
gccaggcctccaccacctgtgcttccagcaaatcgagctccttctgctactgctccatct
ccagtgggggctgggactgctgcaccagctccatcacaaacgcctggctcagctcctcct
ccacaggcccagggaccaccctatcccacctatccaggatatcctgggtattgccaaatg
cccatgcccatgggctataatccttatgcgtatggccagtataatatgccatatccacca
gtgtatcaccagagtcctggacaggctccatacccgggaccccagcagccttcatacccc
ttccctcagcccccacagcagtcttactatccacagcagtaa
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