Paenibacillus psychroresistens: EHS13_00760
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Entry
EHS13_00760 CDS
T06328
Gene name
uvrA
Definition
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_00760 (uvrA)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_00760 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHS13_00760 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_16
AAA_29
RsgA_GTPase
AAA_22
BCA_ABC_TP_C
AAA_18
AAA_23
AAA_25
DnaJ_CXXCXGXG
AAA_24
cobW
NACHT
MMR_HSR1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QGQ93556
UniProt:
A0A6B8RDV1
LinkDB
All DBs
Position
164155..167007
Genome map
AA seq
950 aa
AA seq
DB search
MASEHIVIKGARAHNLKNIDVTIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGQP
HCPTHGIAITAQTVEQMVDRIMEYPEKTRIQILAPLISGRKGEHTKLLGDIQRQGFVRVR
VNGEIIDLSEKIELDKNKKHKIEVVIDRIVVKEDVQVRLADSIETALKISEGRVLIDVAD
HDELLFSQNLACPECGFSIEDLAPRMFSFNSPYGACPDCDGLGSKMIVDPDLLVSDRKKT
IQDGAFEAWAGSTSNYYPQFLASVCLHYKIPRNVAIEKLTEDQMKVLLYGTDGEKIRFRY
ENELGQTRDAMVPFEGIIKNLERRYRDTFSDGIREHIEAYMSSKACGKCKGQRLKAESLA
VTIQGKNIAYSTGLSIGDAQKFFSNLVLTDREMQIATLILKEINARLGFLVNVGLDYLAL
SRAAGTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQKDNARLIETLLHMRDLGNT
LIVVEHDEDTMLAADYIIDIGPGAGIHGGQIISQGTPEQVMADPNSLTGEYLSGRKFIPI
PLKRRATNGKWLEIKGAKENNLRNVNVKFPLGVFACVTGVSGSGKSTLINEILYKTLARE
LNGAKVRSGEFKEILGLEHIEKVIDIDQSPIGRTPRSNPATYTGVFDDIRDLFSVTSEAK
IRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICKGKRYNRETLEVKYKG
KNISEILGMTIEDACEFFKNVPRISRKMQTLFDVGLGYMDLGQPATTLSGGEAQRVKLAA
ELYRRSTGKSIYILDEPTTGLHIHDIARLLEVLHRLVDNGESVLVIEHNLDVIKTADYVI
DLGPEGGSRGGLIVASGTPEEVVKVKGSYTGQYLKPVLERDRARTLAEVH
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgaacatatcgtcattaaaggagcaagagctcacaatctcaaaaacatcgat
gtgaccattccacgtgatcgttttgtcgtattgacaggattaagcggttcaggtaaatca
tccttagcgttcgacacgatttatgcagaagggcaaagaagatacgtagagtcgctttct
gcttacgcccgtcaatttttaggccagatggagaagccggatgtagattctatcgaaggt
ttatctccggctatatctatcgaccagaaaacaacaagccgtaatccccgctcaaccgtc
ggtacggttacagaaatctatgattatctgcgtttgctttttgcgcgtgtcggtcagccg
cattgtccgactcatgggatagcaataactgcacaaaccgttgaacaaatggtggaccgc
attatggagtacccagaaaaaacaagaattcaaattttggctccactgatctcaggtcgc
aaaggggagcacactaagcttttgggcgatattcagcgacaaggctttgttcgagtacgg
gtgaatggcgagattatcgacttgtcagaaaaaatagaattagataagaacaaaaagcat
aaaatcgaagttgttatcgatcggattgtggttaaagaagacgtacaagtcagattagcc
gactcgatagaaactgcgctgaagatctctgagggcagagtacttatagatgtggcagat
catgatgagctgctgtttagtcagaatctagcatgccctgaatgtggcttcagtattgag
gaccttgctccacggatgttttctttcaatagcccttatggtgcttgtccagattgtgac
gggttaggcagtaaaatgattgtagatcccgatctcctggtttccgatcgcaagaagacc
attcaggatggagctttcgaagcatgggcgggtagtacatctaactattatccacaattt
cttgcttccgtttgtctgcattataaaattccacggaacgtggctatagagaagctaaca
gaagatcaaatgaaagttttgttatacggcacagatggggaaaagattcgttttcgatat
gagaatgaacttggacaaacaagagatgccatggttccatttgaagggatcattaagaat
ttggaacgtaggtatcgtgataccttttcagatgggatacgggagcatatcgaggcttat
atgagctctaaggcttgcggtaaatgtaaagggcagcgtcttaaagccgagagcttggct
gtaacgattcaagggaagaatatagcttactccacaggtctgtctattggagatgcacag
aagtttttctcgaatcttgtactgacagatcgtgaaatgcagattgccacactaattctt
aaagagattaatgcacgattgggtttcttagttaatgtgggcttggattacttagcgcta
agtcgagcagcaggcacattatcgggtggggaagcacagcgtattcgcttagcaactcaa
attggttcaagcttaatgggcgtgctatatattctagatgagccgagtattggattgcat
cagaaggataacgctcgtttaatcgagactctactgcacatgcgtgatctaggcaatacc
ctaatcgttgttgagcatgatgaagacactatgttggctgcagattatataatcgatatt
ggtcctggagcaggtatccatgggggccaaattatttcacaaggaacacctgagcaagtt
atggcagatcctaactctttaaccggagaatatttaagtgggcgtaagttcattcccatc
ccattaaaacgtcgtgctactaacggtaaatggctagaaataaaaggtgcaaaagagaac
aacctgcgtaatgtaaatgtgaaattcccgttaggggtttttgcttgtgtaactggggta
tcaggctctggaaaaagtacattgatcaatgagattctgtataagaccttagcgcgtgaa
ctgaatggggcaaaagtcagatcaggtgaatttaaagaaattctcggacttgaacatatt
gagaaagtaatcgatattgatcaatctccaattggacgaaccccacgttctaacccggct
acctatacaggtgttttcgatgatattcgggacttattctccgttacatcggaagcaaaa
atccgcggctacaagaagggtcgttttagcttcaatgtaaaaggcggccgttgtgaagcc
tgtcgaggggatggcatcatcaaaattgaaatgcattttctacccgatgtttatgtacca
tgcgaaatttgcaaaggcaaacgctacaaccgcgaaacacttgaggtcaaatataaaggc
aagaatatatcggagattctaggcatgacgattgaagatgcttgtgaattctttaagaat
gttccgcgcattagccgcaagatgcagaccttattcgatgttggtctcggttatatggat
ttgggtcagcctgcaaccactttatcaggtggagaagcacaacgagttaagcttgcagct
gagttataccgtcgcagtacaggcaagtcgatctatatactagatgagcctactactggc
ttgcatatccatgatattgctcgcttgttagaggtcctgcatcgtttagtggataacgga
gaatccgtgttagtcattgagcataatctagatgtaatcaaaacagctgattatgtgatt
gatttaggacctgaaggtgggagtcgtggtggcttgattgttgcttcaggaacaccagaa
gaagtcgttaaagtaaaaggttcttatacagggcaatacctaaaacctgtgctggaacgg
gatcgcgcacgtaccttagcagaagtacattaa
Paenibacillus psychroresistens: EHS13_15075
Help
Entry
EHS13_15075 CDS
T06328
Gene name
uvrA
Definition
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ppsc
Paenibacillus psychroresistens
Pathway
ppsc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHS13_15075 (uvrA)
DNA repair and recombination proteins [BR:
ppsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHS13_15075 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EHS13_15075 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
UvrA_DNA-bind
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
AAA_18
AAA_14
AAA_22
DnaJ_CXXCXGXG
AAA_33
Viral_helicase1
ATPase
APS_kinase
cobW
NACHT
AAA_24
MeaB
NB-ARC
MMR_HSR1
BTRD1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QGQ96100
UniProt:
A0A6B8RIL8
LinkDB
All DBs
Position
3356147..3359038
Genome map
AA seq
963 aa
AA seq
DB search
MKHHIEVRGARQNNLKNIDVNIPRDKITVITGVSGSGKSSLAFDVIYGEGQRRFLESLSS
FAKSRMNQMKKPDVDFVFGLSPVVAIEQKKGIVNPRSTVGTMTDIYDFMRLLFASVGEAT
CPFCDHSVPIRTSLQIIDHIQQLPEGTELEVLAPVYKIYGENYDTTFDEIRAKGFRTVII
DGERHSLGGAIELEEEMEYRIEVIVDKVIVQPNVFKLLNKTIENSLNLLGEGFIRFEIIS
VPAGVHLDMEMFYANFACPEHHLTKGEMKSNYFSFNDPDSACRTCGGIGTFMRAEARFLI
QNADKSINKMAIDVKLLGAGKNTWHWSMMRSLALHYGFSLDTPLNELPEKIYDILFFGTK
GEKFPFLPAKDATKSQFRSEGKLMAYGGFVHIINWWYKLYMKRSQHRNNAEDAFYKRVMI
EHTCPDCEGKKLKSQRFAIQIGNANIHELCTMSLKELYPYLNKIELSSEKAHVGKQIISE
IQSRLMLLLDIGLEYLSLGRRSDTISGGEAQRIRLSTQISSGLMGMLYVLDEPSIGLHAR
DGERIIDTLKKLRDIGNTIIVVEHDIQTICSADHIIEIGPGPGIHGGRIIAEGTADQLQN
HSESITGAFLSGARRIEVPALRRQLSGAALSIKGARANNLRNVNVDIPLGVMVCITGVSG
SGKSTLINEVMCKQLDLLFNNARIIPGEHDALLGHEHLTGIITIDQSPIGRSTRSNPATY
VGFFDKIRELYEEAASAAGSQLNKGDFSFNQKNGGRCENCQGEGLITTQLQFMPDIESVC
PVCKGERFNEEVLDIRINEKNIAQILEMSIEEAAPFFAEEPAIMRKLTVLNQLGLGYLRI
GQSSTTLSGGEAQRIKLATELSKLKRGSHNLYILDEPTTGLHLHDIQKLIDCINQLVEAG
HSVIVIEHHLDMIKVADHIIDMGPEGGYDGGQVVAFGTPEEVAETAGSLTGRFLQEVLRE
IPI
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatcatattgaagtgcgcggtgctaggcagaataacctaaaaaatatcgatgtt
aacattcctcgcgataagatcacagtcattacaggagtaagcgggtcaggtaaatcctca
ttggcctttgatgtcatctatggggaggggcagcgtcgattcctcgaatcgctctcaagc
tttgcgaaaagccggatgaatcaaatgaaaaagccggatgttgactttgtttttggatta
tcaccggttgttgctattgaacaaaaaaagggaatagtcaatccccgatcaactgtagga
acgatgacggatatttatgattttatgcgattgcttttcgcctctgttggtgaagcgacg
tgtccattctgcgatcattccgtacctattcgcacatctctgcagataattgatcacata
caacagcttcccgaaggtacggagcttgaagtactagcgcctgtctataaaatctatgga
gaaaactatgatacaaccttcgatgaaatcagggctaaagggtttcgaaccgttattatt
gacggtgaacggcatagcttgggcggtgctattgaactagaagaagaaatggaatatcgc
attgaggtcatagtagacaaagttattgttcagcccaatgtgttcaaactcctcaataaa
acgattgaaaacagcttgaatctactcggtgaaggctttattcggtttgaaatcatttct
gtgccggctggagttcatttggacatggagatgttctatgcaaatttcgcatgtccggag
catcatcttactaaaggtgagatgaagtcgaattatttctcatttaatgatccggatagt
gcttgtcgaacatgtggcggaattggaaccttcatgcgtgcagaagccagattcttaatt
cagaatgcagataaaagtattaataaaatggctatcgatgttaaactgctgggtgcaggc
aagaatacttggcattggtcaatgatgcgcagccttgccttgcactatggatttagtttg
gatacaccacttaatgaattgccggaaaagatctatgatattcttttctttggtacgaaa
ggagagaaattcccgtttcttcctgccaaggatgcaactaaatcccaatttcgttctgaa
ggtaaattaatggcttatggcggattcgttcatataattaactggtggtacaagctttat
atgaaacgcagccaacatagaaataatgcggaagatgctttctataagcgagttatgatt
gaacacacttgcccagattgtgaagggaaaaagctaaagtcacagcggtttgcaatccaa
ataggtaatgccaatattcatgaattatgtacaatgtcgttaaaagagctttacccttac
ttgaataaaatcgagctctcttctgaaaaagcacatgtgggtaaacagattatttcggaa
atccagtcaagattaatgctgctgttggatattggtttggagtatttaagcttgggtcgc
cgttcagatacgatatcaggtggcgaggcacagcgaataaggctttccacccaaatcagc
tctggtcttatggggatgttgtatgtgctggatgagcccagtattgggttgcatgccaga
gatggtgaacgcattattgatacattgaagaagctgcgtgacattgggaacacaattatt
gttgtggagcatgatatccaaactatttgcagtgcggatcatattattgaaatcgggcca
ggaccaggtatacatggcggtcgtattattgctgaaggaactgcggatcagctgcagaat
cattcagaatctattactggtgcttttctatccggtgcaaggagaatcgaagtaccagcc
ttgcgccggcagctgtcaggagctgcgctttccatcaaaggtgcaagagcaaacaatctg
cgtaacgtaaatgtggatattccattgggagtaatggtgtgcatcacaggtgtttccggc
tcaggaaaaagcacgttaatcaatgaggttatgtgtaaacaattagatttactgttcaat
aatgcacggattattcctggtgaacacgatgctttattaggacatgaacatttaaccggg
attatcacaatcgatcaatcccctattggccgcagcacacgttcgaatccagcgacctat
gtgggcttttttgataagattcgtgagctatatgaagaagctgctagtgcagcaggcagc
caattaaataaaggcgatttcagcttcaaccagaagaatggcgggcgctgcgagaattgc
caaggtgaaggtcttattacaacacagctgcagtttatgcctgatatcgaatcggtttgt
cctgtttgcaagggagagagatttaacgaggaagtactggatatcagaatcaacgagaag
aacattgcacaaatactggagatgagcattgaagaagccgcacctttttttgctgaagag
cctgccataatgcgaaaattaactgtgttgaatcagctgggtcttggttatttgcgaatt
ggacaatcctcaactacattatccggtggcgaggcacagcgcatcaagcttgcaaccgaa
ttgagcaaattgaagcgcggttcacataacttgtatatcttggatgagccgacaacaggc
ttgcatttgcatgatatccagaagcttatcgactgtatcaatcagctagtggaggctgga
cattcggtcattgtcattgagcatcacttggatatgattaaggttgccgatcatattatc
gatatgggtccagaaggtggttatgatggtggtcaagtggttgcatttggtacacctgag
gaagtagctgaaacagctggatcgctaacaggtagatttttacaggaggttctaagagaa
atccctatttag
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integrated database retrieval system