KEGG   Paenibacillus psychroresistens: EHS13_01385
Entry
EHS13_01385       CDS       T06328                                 

Gene name
holB
Definition
(GenBank) DNA polymerase III subunit delta'
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_01385 (holB)
   03430 Mismatch repair
    EHS13_01385 (holB)
   03440 Homologous recombination
    EHS13_01385 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_01385 (holB)
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_01385 (holB)
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_01385 (holB)
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_01385 (holB)
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_01385 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_5 IN_DBD_C
Other DBs
NCBI-ProteinID: QGQ93663
UniProt: A0A6B8RDP0
LinkDB
Position
279890..280870
AA seq 326 aa
MSFATIVGQDRVKRLLQNGLKHETLSHAYIFSGPSGSGRRQMALTLAQAVYCLEMKDDAC
GTCLNCRKVAHQNHPDLHWIEPDGASLKIEQIRELQKQFAYRSTTSQTKVYVLQNADRMT
TQAANSLLKFLEEPTSDVLAILIAENGHALLPTIQSRAQWVPFTPLGVQELSQKLIAEGL
SATLVLPAVHIVAGLDAARELIQGNWFAEARNVMIQLVMEALTSYPAALLSIQQKVIKAE
WVEHLPIFLDLSILWFKDMVHFICGREDSMIYLDRIDWIRQHAFSREIQYWVACMEHTIE
LQKRLRFNANAQLAMEKWIIDIQRGD
NT seq 981 nt   +upstreamnt  +downstreamnt
atgtcatttgctacaatagtaggtcaagatcgcgtaaaacgtttattgcagaatggttta
aagcatgagacgctgtcgcatgcatatatttttagtggacctagtggctctgggcgcaga
cagatggcgctcacactagcacaagcagtttattgtttggaaatgaaagatgatgcttgc
ggtacatgcttgaattgccgcaaagtagctcatcagaaccatccagacttacattggatt
gaaccagatggggctagcttgaagatcgaacaaattcgtgagctgcagaagcaatttgct
tatcgttcgaccacctcgcagactaaagtatacgtacttcagaatgcggaccgaatgact
actcaagcggctaacagcttgcttaaatttctagaggaaccaacatccgacgttttggcg
attctaattgctgagaatggacatgctcttctgcctaccattcaatcacgtgcccaatgg
gttccttttaccccactaggggttcaagagctatctcaaaagctaattgcagaggggctt
tctgcgactttagtattacctgcggttcatattgttgcaggcttagatgctgctagagag
cttattcaggggaattggtttgccgaagcacgaaatgtaatgatacaattggttatggag
gcgttgaccagttatccggcagcactgctatccatccaacaaaaggtaataaaagctgaa
tgggtcgagcatttaccaatatttcttgatttgtcgattctttggtttaaagatatggta
cattttatctgcggacgagaagatagtatgatctatttagatcgaatagactggataaga
cagcatgcattttctcgcgaaattcaatattgggttgcctgtatggaacataccatagaa
ttgcaaaagagactccgatttaatgctaacgcacagttagctatggagaagtggatcatt
gacatacaaaggggggattaa

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