KEGG   Paenibacillus psychroresistens: EHS13_03955
Entry
EHS13_03955       CDS       T06328                                 

Definition
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_03955
   03430 Mismatch repair
    EHS13_03955
   03440 Homologous recombination
    EHS13_03955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_03955
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_03955
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_03955
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_03955
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_03955
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DUF5051 RNase_H_2 Pox_ser-thr_kin CAF1
Other DBs
NCBI-ProteinID: QGQ94119
UniProt: A0A6B8RCZ9
LinkDB
Position
834177..834797
AA seq 206 aa
MALINEITVFDFETTGLSAEKDQVIEMAAIRVANGQVVGEFSTLIQYDGKLSPKIIELTG
IHDEELKHGFDEVTAFKIFNRFIGNSVIVAHNAAFDLGFLHHTLMRLAKRSFNNSFIDTL
TISRERTVFPYKLTDLCARYNIELIGAHRALSDVYGCWHLYEALSKEVKIEDYINKLGYM
SKYGPPKWAPDYAVLQAQENRYEDRR
NT seq 621 nt   +upstreamnt  +downstreamnt
atggctttgattaacgaaataaccgtgtttgattttgaaacgacgggcttaagcgctgaa
aaggatcaggtcattgaaatggctgcgattcgggttgcgaatggacaggttgttggtgaa
ttcagtaccttgattcaatacgatggcaagctgtctcccaaaattatcgagctaacaggg
atacatgatgaagaattaaagcatggctttgatgaagtgactgcttttaaaatattcaat
cgtttcatcggaaatagtgtgattgtcgctcataatgctgcctttgatttaggctttcta
catcatactttaatgcgtctggcgaaacgttccttcaataactcttttatcgatacattg
acgatcagtcgcgagcggacggtttttccttataagcttacggatttatgtgcaagatat
aatattgaattgattggcgctcatcgtgctctaagtgatgtttatggctgctggcattta
tatgaagctttaagcaaagaagtgaagattgaagattacatcaataagctaggctatatg
tcgaaatatggaccacccaagtgggcgccggactatgcggtattgcaggcccaagaaaat
cgttatgaagatcgcagataa

KEGG   Paenibacillus psychroresistens: EHS13_20045
Entry
EHS13_20045       CDS       T06328                                 

Definition
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_20045
   03430 Mismatch repair
    EHS13_20045
   03440 Homologous recombination
    EHS13_20045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_20045
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_20045
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_20045
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_20045
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_20045
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DUF5051
Other DBs
NCBI-ProteinID: QGQ97012
UniProt: A0A6B8RMU5
LinkDB
Position
complement(4412649..4413257)
AA seq 202 aa
MLNEMDLTIWDFETSGLDPLKEQVIEMAALKIHKGIITGSFNCFVKHDKQLSQKITELTG
IVDDDLKDGFDEDIAFKMLKQFMGNNIIGAHNATFDLAFLHHSRMRLFNQSFSNSFIDTL
TIARDRVPFPHKLTDLTTRHNIEMDTAHRALADVYGCYKLLQHYDKEESVEPWINRLGYV
KKWGPATWYPEHAKPFEQGYKN
NT seq 609 nt   +upstreamnt  +downstreamnt
atgttaaatgaaatggacttaaccatctgggacttcgagacttcgggtcttgatccatta
aaagagcaagtaatcgaaatggctgctctcaagattcacaagggcatcataacaggctca
ttcaattgcttcgtgaagcacgacaaacaattaagccaaaagataacggaactcactgga
atcgttgatgatgatctaaaggatggctttgacgaagacattgcatttaaaatgctcaag
cagttcatgggcaacaacatcataggtgcgcacaatgcaacttttgaccttgctttcctg
caccattctcgcatgcggctattcaaccaaagcttcagcaatagtttcatagacacgctg
acgattgctagagatcgagtgccgttccctcacaaactcactgaccttactacaaggcat
aacattgagatggacacagcccacagagcccttgctgatgtttatggctgttacaagctt
ctgcaacattacgataaagaggaatctgtagagccttggatcaatcggctagggtacgtt
aaaaagtggggaccagcgacttggtatcccgaacatgcaaaaccatttgagcaaggatat
aaaaactga

KEGG   Paenibacillus psychroresistens: EHS13_22365
Entry
EHS13_22365       CDS       T06328                                 

Definition
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_22365
   03430 Mismatch repair
    EHS13_22365
   03440 Homologous recombination
    EHS13_22365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_22365
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_22365
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_22365
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_22365
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_22365
SSDB
Motif
Pfam: RNase_T DUF5051 DNA_pol_A_exo1 RNase_H_2 PP_kinase_C Polysacc_deac_2
Other DBs
NCBI-ProteinID: QGQ97435
UniProt: A0A6B8RPF1
LinkDB
Position
complement(4901517..4902260)
AA seq 247 aa
MKEPKPPSGMWQLYKMGGITPAINSMFNPQNAQQMAFIRSIMKEQRQNSLYDVTLNDLHA
VVFDLETTGFSPYNGDEIISIGAVVVEGRDVKSEETFYSNVNPKRNIPTVVEELTGITNK
MGSEAPELIQALRRFLEFVQKRILIAHGTGHDKQFLNSALWKTSKTNLTHRVLDTMMIAK
WLHPKRRDFGLDSLLDHYEISIDPAQRHHALGDSLMTANLWCKFMKEMENREVNNLGDLY
AHLSHMA
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaaggaacctaagccccctagcgggatgtggcagctctataaaatgggcggcattact
cctgcaattaattcgatgtttaatccgcagaatgcacagcaaatggccttcatccgatct
atcatgaaggagcaacgccaaaattcattatatgatgtaactttgaatgatctgcatgct
gtggtgtttgatctggaaactactggattctccccttataatggggatgaaattatctca
attggcgctgtggttgtggaaggcagagatgttaagtcagaagagaccttctatagcaat
gtgaatcccaaacgcaacattcctacagttgttgaggagcttacggggataactaataag
atgggatcagaagcaccggaattaatccaagccttacgcagatttttagaatttgtccag
aagcgaatattgattgcgcatggaacagggcatgataagcagtttttgaactcggcttta
tggaaaacctcaaaaacgaatctcactcaccgggtcttggatacgatgatgattgccaaa
tggctgcatcctaaacgtagggattttggactggattcgttattggatcattacgagatt
tcgatagatccagctcagcgacatcatgcgttgggggattctttaatgacagccaatctt
tggtgtaagtttatgaaggaaatggaaaacagagaagtcaataatttgggcgatctatat
gctcatttaagtcacatggcttag

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