Paenibacillus psychroresistens: EHS13_19995
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Entry
EHS13_19995 CDS
T06328
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K24072
positive control factor
Organism
ppsc
Paenibacillus psychroresistens
Brite
KEGG Orthology (KO) [BR:
ppsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsc03021
]
EHS13_19995
Transcription machinery [BR:
ppsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EHS13_19995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Terminase_5
HTH_10
GerE
HTH_23
HTH_38
HTH_17
Sigma70_ECF
HTH_28
HTH_24
HTH_29
DUF3793
Motif
Other DBs
NCBI-ProteinID:
QGR00170
UniProt:
A0A6B8RX95
LinkDB
All DBs
Position
complement(4407679..4408209)
Genome browser
AA seq
176 aa
AA seq
DB search
MKDWNDLKLSYRGTLRMLQKKGKQLECDLEKAIALNVDLDSIMKDIDFIKDMITDVNLAI
NWLHTGKMPGSKRGIERRSAYQKNKLMDPLRMQAFSNQYNSRSASTLTDWQRYQLEDALS
RLSPQQRECYELAHGGCYPYAEIAIMLGISKGTVQGYVERAQKKVTEDLNSSLFLI
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattggaatgatctcaaattatcatatcgaggcacattgcgaatgctacagaaa
aagggtaagcagctcgaatgtgatttagaaaaggccatagcattaaatgtagatctcgat
tcaataatgaaagatatcgattttattaaggacatgataacggacgttaacctagcaatt
aactggctacatactggtaaaatgccaggtagcaagagaggcatcgaaagacgatctgca
tatcaaaaaaacaaactaatggacccgttaaggatgcaagcattctctaatcaatataat
tcgcggagcgcatcaactttaactgattggcaaaggtatcaacttgaggatgctttgagc
cggttgagcccgcagcaaagagagtgttatgaactagctcatggtgggtgttacccatac
gctgaaattgctattatgctcggcatcagtaaagggacggtccaaggctacgtggaacga
gctcaaaagaaagttacggaagatttaaatagcagcttgttcttaatatga
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