KEGG   Paenibacillus psychroresistens: EHS13_24405
Entry
EHS13_24405       CDS       T06328                                 

Definition
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_24405
   03430 Mismatch repair
    EHS13_24405
   03440 Homologous recombination
    EHS13_24405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_24405
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_24405
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_24405
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_24405
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_24405
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon tRNA_anti_2 DUF655 DUF2288 SSB
Other DBs
NCBI-ProteinID: QGQ97806
UniProt: A0A6B8RQZ3
LinkDB
Position
complement(5345183..5348737)
AA seq 1184 aa
MDNFVHLHVHSEYSLLDGAARIDSLTAKAAELGMSSLALTDHGVMYGAIPFYKACLKHGI
KPIIGCEMYFTSGSLHTKASRQDQPIYHLLLLAKNHIGYQNLMKLCSIAHLEGFHYKPRI
DLKHLALHSEGIICLSSCLGSEISQHLLHDRYEEAKLAAEKYQLIFEDDFYLELQDHGIY
EQKKVNLSMIRLSQETGIPLVVTNDVHYVLSEDHAMQDILLCIGTGKTVDDQDRMKFAST
QLYLKSGAEMAGLFAHAPGAMTNTAEIAAKCELKLEFGQSILPRFEPIPEGLSAGEYLKQ
LCLTGLEQRYGESEDWLNIEPREVLDQRLSYELSVIQTMGFSDYFLIVWDFIRYAHEQNI
AVGPGRGSSAGSLVAYVLKITDVDPIRYQLLFERFLNPERISMPDIDIDFSDERRDEVID
YVVDKYGAERVAQIITFGTMAAKGAIRDVGRVLNMPYHEVDRVAKMIPFQLGITLEEAIA
GSPELQALSHSHAKTAELLQIAMKVEGMPRHASTHAAGVVISNEPLTQYVPLQEGTVKTP
LTQYAMEHLESIGLLKMDFLGLRTLSIIERTQASIKSSFGEPLNFKKIPDNDPLTYEMLS
RGDATGVFQMESQGVRRVLKDLKPTEFEDIISVLALYRPGPMEFIPKYIQGKHKEIEVDY
PHESLIPILQTTYGIIVYQEQIMQIASKMAGFSLGESDVLRRAVSKKKREVLDQQRAHFV
AGSLQEGYSDEDAHKVYDMIVRFADYGFPRAHATAYGVIAFQTAYLRAHYPAHFMSSMLT
AVMGSHRKVAEYVDDCRRLQIKVLPPDVNESGMIFTPVKVDAEGTMVIRFGLAAIKNVGT
QAIDSIMKERLERPYDSLLDLCRRVDLRVCNKRVLESLLQAGAFDSLEGHRAQLLAILDA
TLEAAIKWKKERDELQLFLFGFDEEINWTIEYPEIRPFTIMQQLELERELLGIFLSGHPL
DAYETLLQTSGVSAMIHLPELPDLSEVIVAGMVISVKTIVTKKGMQMAFIELEDRVEKVE
VVLFPETWKRFNSFIQKGELILVKAKLQLQDEDIKLLADQVVAMNNPDQQDQLLLQFQRT
TYSKQQSRNVEPKPRSTPPVEKPKPASSKQQRVFVKISEAYENQTILARLKAALQDHSGS
LQVVLFYEREQKMVALNNQYNVKPSEDFIRSLEALMGSGAIKVQ
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggataattttgtccatcttcatgtacatagtgaatatagcttattggatggtgctgca
cgaattgatagcttaacagcaaaagcagcggaattaggtatgtcttcgttagctttaacg
gatcatggtgtcatgtacggggcaatccctttttataaagcttgtttgaagcatggaatt
aaaccgattattggctgtgaaatgtattttacaagtggttctctacatactaaagcaagc
aggcaagaccagccgatctatcacctgctgttattggcgaagaatcatatcggctaccag
aatttaatgaagctttgttccattgctcatttagaaggctttcactataaaccaagaata
gacttgaagcatcttgccttacattccgaaggaatcatttgtttaagctcgtgcctagga
agtgagatttcgcagcatctgctgcatgatcgttatgaggaagctaagctggcggctgag
aaatatcagcttatttttgaggatgatttctatttggagctgcaggatcacggaatctat
gagcaaaagaaagtgaatttgtcgatgatccgcctaagccaagaaacggggatcccgcta
gttgtgaccaatgatgtgcattatgtattatctgaggatcatgcgatgcaagacattctt
ctctgtattggcacagggaaaaccgttgatgatcaggacaggatgaaattcgcttcgacg
cagctttatctgaaaagtggagcggaaatggctggattgttcgcacatgcaccgggggcc
atgacgaatacggccgagattgctgcaaaatgtgagcttaagctggagtttggccaatcg
attctgcctagattcgaacccattcccgagggattatcagcgggtgaatatttaaaacag
ctgtgtttaacagggctggaacaacgttatggcgaaagcgaagattggttaaatatagaa
ccgcgtgaagtactggatcaacgtctcagctatgaattaagtgtcattcaaactatgggg
ttttccgattatttcctaatcgtttgggattttattcgttatgcacatgaacagaatatt
gctgtaggaccaggacgtggttcatctgcgggtagtttagtcgcttacgttctgaagatt
actgacgtcgatcccattcgttatcaattattgtttgagcgcttccttaatccagaacga
attagcatgccggatatcgatattgatttcagcgatgagcggcgagatgaagtcatcgat
tatgtcgtggataaatatggggcagagcgtgtagcccagattattacattcggtaccatg
gcagccaagggggctattcgtgatgtcggcagggtattgaatatgccttaccatgaggta
gatcgcgtagctaagatgatcccctttcagctaggcattactcttgaagaggcaatcgca
ggcagtccggaattgcaagctttaagccatagccatgctaagacagccgagctcctgcaa
attgccatgaaggtagaaggtatgccgcgtcacgcttccacacatgcagcaggcgtcgtg
atatcgaatgaacctttaactcaatatgtccctttgcaggaaggcacggtgaagacaccg
ttgactcaatatgctatggagcatctagagagcattggtctattaaaaatggatttcttg
ggcttgcgcacgctttcgattattgaacgaacgcaggcatcgattaaaagctcgtttggc
gagcccttgaacttcaagaagataccggacaatgatcccttaacctatgaaatgttaagt
cgtggtgacgcaacaggcgtttttcaaatggagtctcaaggtgttagacgtgtgcttaag
gacttaaagccaacggaattcgaggatattatttcagtgttagcactttatcgtcctggg
ccaatggaattcattcctaaatatattcaaggcaagcataaagagattgaagtggattat
ccacatgaatctctcattcccattctgcagacaacctatgggatcattgtttatcaggaa
caaatcatgcaaatcgcttctaagatggcaggtttctctctgggagagtcagatgtgctt
cgccgtgcggtcagcaagaaaaagcgtgaggtgctggatcaacaacgggcgcattttgtc
gccggcagcttgcaagagggctattcagatgaggatgcgcataaagtatacgatatgatt
gtccgcttcgctgattatggctttccgcgagctcatgcgacggcttatggcgtgattgct
tttcaaaccgcttatttacgggcacattatccagctcatttcatgagctccatgctgaca
gccgttatggggagccatcgtaaggttgctgagtatgtcgatgattgccgtcgtttgcag
atcaaggtattgccaccggatgtcaacgaaagcgggatgatttttacgccggtgaaggtg
gatgctgaaggaacaatggtcatccgatttggtctagctgcaattaagaatgtaggtact
caagcgattgattccattatgaaggaacgattagaacggccatacgatagcttgcttgat
ttatgccgccgtgtggatttgagagtttgcaataaacgggttttagaatccttgctgcaa
gcaggtgcctttgattccttggagggccatcgcgcccagctgttagctatcttggatgca
accttggaagcggcgatcaagtggaaaaaggagcgggatgagctgcagctgtttttgttt
ggttttgatgaggaaatcaattggacgattgaatatccggaaattcgcccatttacgatc
atgcagcaattggagctagaacgagaattgctcggtatttttctctcaggccatccattg
gatgcctatgaaacactgctgcaaaccagcggtgtttccgcaatgattcatttgccagag
ctcccagacctcagtgaagttattgtcgcaggaatggtcatatcagtgaaaactatagtc
accaaaaagggcatgcaaatggcttttattgagcttgaggatcgagtggagaaagtcgaa
gtggtcttattccctgaaacctggaagagatttaatagctttatccaaaagggtgaatta
atcttagtcaaggcaaagctgcagctgcaggacgaggacatcaaattattggcagatcaa
gttgtggcaatgaataatccggatcagcaggatcagctgcttttgcagtttcaacgcaca
acttactccaaacaacaatcacgtaatgtggaaccgaaaccgaggtcgactcccccagtg
gaaaagcccaagcctgcaagcagtaagcagcagcgtgtttttgtgaaaattagtgaagcc
tatgagaatcaaactattcttgcaaggctaaaagcagctcttcaggatcatagcggttcc
ttgcaggttgtacttttctacgagagggaacagaagatggtcgcactcaataaccaatat
aacgttaagccatctgaggattttattcgctcccttgaagcattgatgggaagcggagct
attaaagtgcagtag

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