KEGG   Paenibacillus psychroresistens: EHS13_32365
Entry
EHS13_32365       CDS       T06328                                 

Gene name
dnaX
Definition
(GenBank) DNA polymerase III subunit gamma/tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ppsc  Paenibacillus psychroresistens
Pathway
ppsc03030  DNA replication
ppsc03430  Mismatch repair
ppsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EHS13_32365 (dnaX)
   03430 Mismatch repair
    EHS13_32365 (dnaX)
   03440 Homologous recombination
    EHS13_32365 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppsc03032]
    EHS13_32365 (dnaX)
   03400 DNA repair and recombination proteins [BR:ppsc03400]
    EHS13_32365 (dnaX)
Enzymes [BR:ppsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EHS13_32365 (dnaX)
DNA replication proteins [BR:ppsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EHS13_32365 (dnaX)
DNA repair and recombination proteins [BR:ppsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EHS13_32365 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N TIP49 AAA_30 AAA_5 AAA_22 Rad17 AAA_16 ResIII AAA_14 AAA_19 ABC_tran AAA_assoc_2 AAA_18 PIF1 RNA_helicase T2SSE TsaE DELLA Mg_chelatase Sigma54_activ_2 RP-C_C VirE AAA_28 AAA_33
Other DBs
NCBI-ProteinID: QGQ99225
UniProt: A0A6B8RUE2
LinkDB
Position
complement(7218723..7220522)
AA seq 599 aa
MAHIALYRTWRPQRFQDVVGQKHIIQTLQNSLKENRLTHAYLFSGPRGTGKTTAAKILAK
AVNCERGPAPEPCNECSSCIRITSGAVLDVVELDAASNRGVDEIRDIRDKVKYAPTEVRQ
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVMFILATTEPHKIPATIISRCQRFDFRKVSL
EEQVARLEFVCTQENVEIDLDAMQYIARLSEGGMRDAISLLDQVVSYSGKRITYAEVVAM
TGDVAADQFRKLAEAMQAKDIGLALELIDGFMQEGKSADKCIESLIHYFRDILLIKMMPN
SQVVTDRILDPAAFTEISAAFSRPEIFAMIEILNHYQVEMKYSAQPQTLFEVAIMKICSA
SSEVASDTMKAQPGARVSSNELASLKQKLGQLEQQLQRLLQSGVSTAASSSAPAQNNNSA
QTSRAQSPQQQSSNTMTTSAQPSTSSAPAAAVKRSSVAMDSYLRSVDSADHKQVKLKWSS
VLSQVKDRKITIHAWLTDGEPASIHDDTVLLAFNSAMHRETTEKPANKQLIEQVMTEVFG
QPMRFSSMMKKDWNEARSEMVAPVEEMVLEPEEPGVVKEEWIHEAIQLFGEDMVTIKED
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggcgcatattgcattatatcgaacttggcgaccgcaacgttttcaagatgtcgtcgga
caaaagcatattatccaaaccttacagaactcccttaaggagaataggctaactcatgct
tatttgtttagtgggcctcgaggaacagggaagaccacagctgctaagatcttggctaag
gctgtaaactgtgaacgaggaccagcaccagagccttgcaacgaatgttcttcctgtata
aggataacaagtggtgcagtactggacgttgttgagctagatgctgcctctaatcgcggg
gtagatgagattcgtgacattcgtgataaagtcaaatatgccccgacggaggttcgtcag
aaggtatatattattgatgaggtccacatgcttactacagaggcatttaatgctctgctt
aagacattggaagaaccacctgcacatgttatgtttattctagcaacaacagagcctcac
aaaattcctgcaacaattatttctagatgtcagcgatttgattttcgcaaagtttcttta
gaggaacaagtcgcaaggttggaatttgtatgtactcaagagaatgtcgagattgatcta
gatgcgatgcaatatatcgcaagattatccgaaggcggcatgcgcgatgctataagcttg
ctcgatcaagtcgtttcttattcaggcaaacgcattacatatgccgaagttgtcgcaatg
acaggtgatgtggctgcggatcaatttcgtaagctagcagaagctatgcaggctaaggat
atagggcttgctttggaattaatcgatggattcatgcaggaaggcaaaagcgcggacaaa
tgcatcgaaagcctgattcattattttcgagacattttacttatcaaaatgatgccgaat
tcacaggttgtcacagatcgtattcttgacccggcagcatttacagagatttctgcagct
ttcagtcgtccagagatattcgcaatgattgaaattttgaaccattatcaggttgaaatg
aagtactccgctcagccacaaaccttatttgaagtagctatcatgaaaatttgtagtgcg
tctagcgaggtggcttcagatacaatgaaggcacaaccaggtgcgagggttagctcaaat
gagcttgcatcgctaaaacagaagctgggtcaattggaacaacagctacagcgcttgctg
cagtctggagtatctacagctgctagctcatcggctcccgcgcagaacaacaattctgca
cagacatcaagagcacaatctccacaacagcaaagctctaatactatgacaacatcagca
cagccttcaacatcgtctgctcctgcagctgcagtgaaacgatcatccgttgcaatggac
agctatttgcgcagtgtagattcagccgatcacaaacaagtgaagctgaaatggagctcg
gtattaagccaagtcaaagatcgtaaaataacgatacacgcttggctcacagatggtgaa
cctgcttctattcatgacgatactgttcttttggcgtttaacagtgccatgcatcgtgaa
acaaccgagaaacctgctaataaacaattaattgaacaagtaatgaccgaggtttttggt
cagcctatgcgattctccagtatgatgaagaaagattggaatgaagctaggtcagaaatg
gtcgctccagttgaagagatggtgcttgagcctgaagaaccaggtgtggttaaggaagaa
tggattcatgaagcgatacaattgtttggcgaagatatggtcacaataaaagaagattaa

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