Pseudomonas pseudoalcaligenes: BN5_0003
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Entry
BN5_0003 CDS
T03772
Symbol
recF
Name
(GenBank) DNA replication and repair protein recF
KO
K03629
DNA replication and repair protein RecF
Organism
ppse
Pseudomonas pseudoalcaligenes
Pathway
ppse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BN5_0003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppse03400
]
BN5_0003 (recF)
DNA repair and recombination proteins [BR:
ppse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BN5_0003 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_16
AAA_13
ABC_tran
AAA_27
DUF2813
Motif
Other DBs
NCBI-ProteinID:
CDM38619
UniProt:
W6R9S3
LinkDB
All DBs
Position
3016..4119
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AA seq
367 aa
AA seq
DB search
MSLSRITVTGVRNLHPVTLSPSSRINILHGANGSGKTSVLEAIHLLGLARSFRSTRLQPV
IHYEQPACTIFGQVQLAGGGSCNLGISRDRQGELLIRIDGQNARSAAQLADLLPLQLINP
DSFRLLEGAPKIRRQFLDWGVFHVEHRFLGAWQRLQKALRQRNSWLRHGILDGASQAAWD
RELCSASEEIDTYRRAYIQALKPVFERTLAELLQLEGLTLSYYRGWDKDRELSEVLATSL
FRDQQLGHTQAGPQRADLRLRLAGHNAAEILSRGQQKLVVCALRIAQGHLVNEAKRGQCI
YLVDDLPSELDEQHRQALCRLLEDLCCQVFITCVDHELLREGWQTDTPVAMFHVEHGRIT
QTQDHRE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtccctaagccgtatcacggtcaccggggtacgcaatctgcatccggtgaccctctcc
ccctcctcccgcatcaacatcctccacggcgccaacggcagcggcaagaccagcgtgctc
gaggcgatccatctgctcggcctcgcccgctccttccgcagtacccgcctgcagccagtc
atccattacgaacaacccgcctgcaccattttcggtcaggttcagttggccgggggaggc
tcgtgcaatctgggtatctctcgcgatcgtcagggtgagctgctgattcgtattgatggg
cagaatgcgcgtagcgctgcgcagctagccgatctgttgccactacagctgataaacccc
gatagttttcgactgcttgaaggtgccccgaagattcgtcggcagtttctcgattggggt
gtgttccacgtggaacatcgctttctcggcgcctggcaacgcctgcagaaagccctacgg
cagcggaactcgtggctgcgccatggtatacttgacggtgcttcgcaggccgcatgggac
cgcgagctatgcagtgccagcgaggagatcgacacctatcggcgagcctatattcaggct
ttgaaaccagtgttcgaacgaacccttgccgagctgctgcagttggaaggtctgaccctg
agttactaccgaggttgggacaaggatcgagagctgagtgaggtgctcgccacttccctg
ttccgtgaccagcaactcgggcacacccaggctggacctcagcgcgccgatttgcgtctg
cgcctggcggggcataacgcggcagagattctgtcgcgaggacaacagaaactggtggtg
tgcgctttgcgcatcgcccaaggccacttggtcaacgaagccaagcgtggccagtgtatc
tatctggtggacgacctaccgtcggagctggatgaacagcatcgtcaggcattgtgccgg
ctgctggaagatttgtgctgccaggtgttcatcacctgtgtagatcatgaattattgagg
gaaggctggcagacggatacgccggttgccatgttccacgtggaacatggccgtatcacc
cagacccaagaccatcgggagtga
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