KEGG   Pseudomonas pseudoalcaligenes: BN5_1419Help
Entry
BN5_1419          CDS       T03772                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
ppse  Pseudomonas pseudoalcaligenes
Pathway
ppse00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:ppse00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    BN5_1419 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:ppse01002]
    BN5_1419 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppse01011]
    BN5_1419 (dacB)
Enzymes [BR:ppse01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     BN5_1419 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     BN5_1419 (dacB)
Peptidases and inhibitors [BR:ppse01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   BN5_1419 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:ppse01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   BN5_1419 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2 IQ SdpA
Motif
Other DBs
NCBI-ProteinID: CDM40018
UniProt: W6QVK4
LinkDB All DBs
Position
complement(1517736..1519172)
Genome map
AA seq 478 aa AA seqDB search
MIQRFRHLALSALLLPLALSCHAANAALPAKVEQALKANKISNNSLSVMTVPLGGQAGGL
QFNADISVNPASTMKLVTTYAALELLGPNHQWKTEFYADGPLKDGVLHGNLYLKGGGDPK
LNMEKLWLLLRDLRINGVRQVQGDLVLDRSFFVAPQLPAFNDDGGDANKPFLVKPDSLLI
NLKAQRFITRAEGGKAHIAMDPPIATVRIDNQVRVLKAATCPAWPDIRYNAVEQYDGTTL
IVSGQLAEGCSAQTYLSLLDHPSYAAGAVRGIWQELGGKILGKDRLGPVPEKARMLVRAF
SPDVVEIVRDINKYSNNTMARQLFLSIGAQFRTEADKDDAMAAQRVIRSWLARKGITAPH
LVMENGSGLSRAERISAREMALILQAAWRSPYAAEFRSSMPLVAMDGTMRRRLQRTPLVG
EAHIKTGTLNNVRAIAGYSRDSNGQDWAVVAILNDPKPWGATSILDQVLLETYKQPKR
NT seq 1437 nt NT seq  +upstreamnt  +downstreamnt
atgattcagcggtttcgccatctggcgctgagcgccctgcttctccccctcgccctgtcc
tgccacgctgccaacgccgcactccctgccaaggtcgagcaggcgctgaaggccaacaag
atttccaacaactcgctgtcggtgatgaccgtgcctctgggcggacaagctggcggcctg
cagttcaatgccgatatctcggtcaacccggcctccaccatgaagctggtgaccacctat
gccgctctggaattgctggggcccaaccatcaatggaagaccgagttctatgccgatggc
ccgctgaaggatggtgtactgcatggcaacctctacctcaagggtggcggcgacccgaaa
ctgaacatggagaaactctggctgctgctgcgcgatctgcgcatcaacggcgtgcgccag
gttcaaggcgatctggtgctcgatcgcagcttcttcgtggccccgcagttgccggcgttc
aatgatgacggtggcgatgccaacaaacccttcctggtcaaacccgactccctgctgatc
aacctcaaggcgcagcgtttcatcacccgcgccgaaggcggcaaggcgcatatcgccatg
gacccgccaatcgccactgtccgtatcgacaatcaggttcgcgtgctcaaggctgcaacc
tgtccggcctggcccgatatccgctacaacgcggtggagcagtacgacggcacgaccctg
atcgtcagcggccaactggctgaaggctgcagtgcgcagacctacctgtcgctgctcgac
catcccagctacgccgccggcgcggtacgcggtatctggcaggagctgggcggcaagatt
cttggcaaggaccgtctgggccctgttccggaaaaagcccgcatgctggtacgcgccttc
tccccggatgtggtggagatcgtccgcgacatcaacaagtacagcaacaacaccatggct
cggcagctgtttctcagcatcggcgcacagttccgtaccgaagccgacaaggatgacgcc
atggccgcacagcgcgtcattcgcagttggctagcccgcaagggcatcacggcgccgcat
ctggtgatggagaatggctccggcctgtcgcgcgccgaacgcatcagcgcacgggaaatg
gcgctgatcctccaggcggcctggcgcagcccttacgctgccgagttccgcagctcgatg
ccactggtggcaatggacggcactatgcgccggcgcctgcagcgcacgccgctggtgggt
gaggcgcacatcaagaccggcaccctgaacaacgtgcgcgccattgccggctacagccgc
gacagcaacggccaggactgggctgtggtggccatcctcaacgacccaaaaccctggggc
gccacctcgatcctcgatcaggtgctgctggaaacctacaagcagcccaaacgctga

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