KEGG   Pseudomonas psychrotolerans: BJP27_14635
Entry
BJP27_14635       CDS       T05074                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
ppsl  Pseudomonas psychrotolerans
Brite
KEGG Orthology (KO) [BR:ppsl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ppsl03000]
    BJP27_14635
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppsl02044]
    BJP27_14635
Transcription factors [BR:ppsl03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    BJP27_14635
Secretion system [BR:ppsl02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   BJP27_14635
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_2 AAA_16 AAA HTH_28 HTH_24 HTH_50 AAA_7
Other DBs
NCBI-ProteinID: APQ12680
LinkDB
Position
complement(3240403..3241896)
AA seq 497 aa
MTLPAAPDSALPLFIELGQCEDTAQLVLGLVDGIRLLASLDLVQYYRLDATHTQLVLLAQ
SLDGRSAPSGETLPLEQESLLHYCLMQNRSLHLRELDPLLHATAFLPGEGWRSLGCLPLT
GPAGQVEGLLVQASRTRRDLEAHAEVLAPLGRFALAQSQLLERVQARPMTPVPEQPAGTP
ADGFGMLGDGGAMRQVHRLIGKVLHTPITVLLTGETGTGKELVARAIHERGSRRTQPFVV
QNCAALPEHLLESELFGYRKGAFTGAERDRAGLFDAANGGTLFLDEIGDMPLTLQAKLLR
VLQEGEVRPLGSAETHRVDVRIVAATHRNLLRLVEQGTFREDLYYRLTHFPIQLPPLRER
GEDLPLLARHFADQACACLQRSRCRWSSAALDLLAGYAFPGNVRELKGLVERAVLLCEGN
ELLPEHFAIRPTTLAATSSSLTLRERLDQLERGLLVDCLRKNRGNQTQAAQELGLPRRTL
LYRLQRLSIRCADLQLS
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaccctgcctgccgcgccggacagcgccctgccactgttcatcgaactcggccagtgc
gaagacaccgcccaactcgtgctcgggttggtcgacggcattcggctgctggccagtctc
gatctggtgcagtactaccgcctggacgccacccatacccagttggtactgcttgcccag
agtctggatggccgctccgcgccaagcggtgaaaccctgcccctcgaacaggaaagtctg
ctgcactattgcctgatgcagaatcgcagcctgcatctgcgcgagctggatccgctgctg
cacgccaccgccttcctgcccggtgaaggctggcgcagcctgggttgcctacccctgacg
ggtcccgcaggccaggtcgaaggcctgttggtccaggccagccgcacccggcgcgatctg
gaagcccacgccgaggtactggcaccgctcggccgcttcgccctggcgcagagtcagttg
ctggagcgggtccaggcgcggcctatgaccccggtgccggagcaaccggccggcacgcct
gccgatggtttcggcatgctcggtgacggcggcgccatgcgtcaggtacatcgtttgatc
ggcaaggtgttgcacacccccatcaccgtgctgctgaccggcgagaccggtaccggcaag
gagctggtggcccgcgccatccacgagcgcggctcgcggcgcacccagccgttcgtggtg
cagaactgcgcggcgctgcccgagcatctgctggaaagcgaactcttcggctatcgcaag
ggcgccttcaccggcgccgagcgtgatcgcgccggcctgttcgatgcggccaacggcggc
accctgttcctcgacgagatcggcgacatgccgctgacgctgcaagccaagctcttgcgg
gtattgcaggaaggcgaggtgcgcccgctgggcagcgccgagacccacagggtcgacgtg
cgcatcgtcgcggccacccatcgcaatctgctgcgcctggtggaacagggcaccttccgc
gaagacctctactatcgcctgacccatttccccatccagctgccgcccctgcgcgagcgc
ggcgaggacctgccgctgctggcccgccatttcgccgaccaggcctgcgcctgcctgcaa
cgctcgcgctgccgctggtccagcgccgccctggatctgctcgccggttacgcctttccc
ggcaacgtccgcgaactcaaggggctggtggagcgcgccgtgctgctgtgcgaaggcaat
gaactgctgcccgagcacttcgccatccgccccaccaccctcgccgccacctccagcagc
ctgaccctgcgcgagcgcctggaccagctcgaacgcggcctgctggtggactgcctgcgc
aagaaccgcggcaaccagacccaggccgcccaggaactgggcctgccacgtcgcaccctg
ctctatcgcttgcagcgactgagcatccgctgcgccgatctgcaactttcctga

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