Pseudomonas versuta: AOC04_11035
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Entry
AOC04_11035 CDS
T04081
Name
(GenBank) EvpB family type VI secretion protein
KO
K11900
type VI secretion system protein ImpC
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
AOC04_11035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppsy02044
]
AOC04_11035
Secretion system [BR:
ppsy02044
]
Type VI secretion system
Imp/Vas secretion system core components
AOC04_11035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
PBC
Motif
Other DBs
NCBI-ProteinID:
ALE88696
LinkDB
All DBs
Position
complement(2523015..2524550)
Genome browser
AA seq
511 aa
AA seq
DB search
MSVEQTSLQHTKTRDADNAQGVYGALFAKINLSPVAELGAIETFQNPESLSEASADERVT
AAVSVFLDLLQQSSHKVERLDKMLLDEHIASLDAQISRQLDAVMHHPDFQRVESTWRGVK
SLIDQTDFRQNVRIELLDISKEHLVQDFEDAPEIAQSGLYFHTYTQEYDTPGGEPIAAAI
SNYEFNRSPQDIALLRSLSKVAAAAHMPFIGSVGPAFFGKQSMEEVAAIKDIGNYFDRAE
YIKWKAFRESDDSRYIGLLMPRVLGRLPYGPDTVPVRSFNYIESVKGPDHEKYLWTNASF
AFAANMVKSFISNGWCVQIRGPQSGGAVTELPIHLYDLGTGNQVKIPSEVMIPETREFEF
ANLGFIPLSYYKNRDYGCFFSANSAQKPALYDTADATANSRINSRLPYIFLLSRIAHYLK
LIQRENIGTTKDRRLLELQLNKWIGGLVTEMTDPSDDLQASHPLRDAKVTVEDIEDNPGF
FRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagaacaaacatccctgcaacacactaaaacccgcgatgcagataacgcacag
ggtgtatacggcgccttgtttgccaagattaacctcagcccggttgcggagttgggagcg
attgaaacttttcaaaaccccgagtccttgtcggaagcctctgcggatgaacgggtgaca
gcagctgtaagtgtattccttgacctgctccaacagtcttcgcataaagtcgagcgtctg
gacaagatgctgctcgatgagcatatcgcgtccctcgatgcacagatcagccggcaactt
gacgccgtcatgcatcatcctgacttccagcgtgtagagtcgacctggcgcggcgtgaag
tcgttgatcgaccagaccgattttcgccagaacgtgcggatcgaactgctggatatcagt
aaggaacatctggttcaggacttcgaagacgcgcctgaaattgcccagagcggcctgtat
ttccatacctacacccaggagtacgacaccccgggtggcgagccgatcgccgcggccatt
tccaactatgaattcaaccgcagcccgcaggacatagccctgctgcgcagcctgtccaaa
gtggcagccgcagcccatatgccgttcattggatcggtaggcccggcgttctttggcaag
cagtcgatggaagaagtggctgccatcaaagacatcggcaactactttgaccgtgccgaa
tacatcaagtggaaggcgttccgcgagagcgacgattcccgttacatcggcttgctcatg
ccgcgcgtactgggccgcctgccctatggtccggacaccgtgccggtgcgcagcttcaac
tacatcgaaagcgtcaaaggcccggaccacgagaaatacctgtggaccaacgcttcgttc
gccttcgctgcaaacatggtgaagagctttatcagcaacggctggtgcgtgcagattcgc
ggcccgcaatcgggtggcgcggtcaccgaactgccgatccacctgtatgacctgggtacg
ggcaaccaggtgaagattccatccgaagtgatgatcccggaaacccgcgaatttgagttt
gccaacctcggtttcattccgctttcgtactacaagaaccgtgactacgggtgttttttc
tcggccaactcggcgcaaaaaccggcgctgtacgacaccgccgacgccactgccaacagc
cgtatcaattcgcgcctgccgtacatattcctgctgtcgcgcattgcccactacctcaag
ctgatccagcgcgaaaacatcgggaccaccaaggaccgccgtttgctggaactgcaactg
aacaagtggatcggtggcctggtcaccgaaatgactgacccgagcgacgatctgcaggct
tcccatccgctgcgcgatgccaaggtgacggtagaagacatcgaggacaaccccggtttc
ttccgcgtcaagctgtacgcggtaccgcactttcaggttgaaggcatggacgtcaacttg
tcgctggtttcgcagatgcccaaggcaaaagcttaa
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