Pseudomonas versuta: AOC04_22060
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Entry
AOC04_22060 CDS
T04081
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy00260
Glycine, serine and threonine metabolism
ppsy00460
Cyanoamino acid metabolism
ppsy00630
Glyoxylate and dicarboxylate metabolism
ppsy00670
One carbon pool by folate
ppsy00680
Methane metabolism
ppsy01100
Metabolic pathways
ppsy01110
Biosynthesis of secondary metabolites
ppsy01120
Microbial metabolism in diverse environments
ppsy01200
Carbon metabolism
ppsy01230
Biosynthesis of amino acids
ppsy01240
Biosynthesis of cofactors
Module
ppsy_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AOC04_22060 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AOC04_22060 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AOC04_22060 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AOC04_22060 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AOC04_22060 (glyA)
Enzymes [BR:
ppsy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AOC04_22060 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
YfbR-like
Motif
Other DBs
NCBI-ProteinID:
ALE90721
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Position
4918973..4920226
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AA seq
417 aa
AA seq
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MFSKQDQIQGYDDALLAAMNAEDQRQEDHIELIASENYTSRRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIDRAKQLFGADYANVQPHSGSQANAAVYLALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKLYNAVQYGIDTATGLIDYDEVERLAVEHQPKMIIAGFSAYSK
FLDFPRFRQIADKVGAYLFVDMAHVAGLVAAGLYPNPLPYADVVTTTTHKTLRGPRGGLI
LAKANEALEKKFNSAVFPGGQGGPLMHVIAAKAVCFKEALEPGFKTYQKQVIDNARAMAE
VFVKRGYDVVSGGTDNHLFLLSLIRQGLTGKDADAALGRAHITVNKNAVPNDPQSPFVTS
GLRIGTPAVTTRGFKVAQCTELAGWICDILDHLGDADIEADVARQVTALCKDFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaggatcagattcagggctacgacgatgccttgttagcggccatgaat
gccgaagatcagcgtcaggaagatcacatcgaactgattgcctccgagaactacaccagc
cggcgtgtgatgcaagcccagggcagcggcctgaccaacaagtacgccgaaggctacccc
ggcaaacgctattacggcggttgcgagcatgtggataaagtcgagcagctggccatcgac
cgcgccaaacaactgttcggtgccgattatgccaacgtgcaaccgcactccggcagccag
gccaacgcggcggtgtacctggcgttgctcaatgccggggacactgtgctgggcatgagc
ctggcccacggtggtcatttgacccacggcgccagcgtcagtttttccggcaagttgtac
aacgcggtgcaatacggcatcgacaccgccaccgggctgatcgactacgacgaagtcgag
cgtctggccgtcgagcatcagccgaagatgatcattgccgggttctcggcttactccaaa
ttcctcgattttccgcgtttccggcagattgccgacaaggtcggggcatacctgtttgtc
gacatggcccacgtggccggtctggtggcggcgggcttgtacccgaacccgctgccctac
gctgatgtggtgaccaccaccacccacaaaaccctgcgcgggccgcgcggcgggctgatt
ctggccaaggccaatgaagcgctggagaaaaaatttaactcggcggtgttccccggcggc
cagggcgggccgttgatgcatgtgatagccgccaaggccgtgtgtttcaaggaagccctg
gagcccggctttaaaacctatcaaaaacaggtaatcgacaacgcccgggcaatggccgag
gtgtttgtcaaacgcggttatgacgtggtctcgggcggcaccgacaaccacctgtttttg
cttagcctgatccgccagggcctgaccggcaaagacgctgatgcagccctgggccgggct
catatcacggtcaataaaaacgcggtgccgaacgatccgcaatcacccttcgtgacttcg
ggcctgcgcatcggcaccccggcagtcaccacccgcggcttcaaagtggcgcaatgcacg
gagctggccggctggatctgcgacatcctcgatcacctcggcgatgccgatatcgaggct
gatgtggcgcgccaggtaacggcactgtgcaaagacttcccggtttatcgctga
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