Pseudomonas versuta: AOC04_22785
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Entry
AOC04_22785 CDS
T04081
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppsy
Pseudomonas versuta
Pathway
ppsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AOC04_22785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppsy03021
]
AOC04_22785
03400 DNA repair and recombination proteins [BR:
ppsy03400
]
AOC04_22785
Enzymes [BR:
ppsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AOC04_22785
Transcription machinery [BR:
ppsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AOC04_22785
DNA repair and recombination proteins [BR:
ppsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AOC04_22785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALE90853
LinkDB
All DBs
Position
5064261..5065262
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacacctcgccatattgatgtgcaagttgtcagt
ccaacccgcgctaaaatcacactcgagcctctcgagcgtggttttggccacaccctgggc
aacgcgctgcgacgcatcctgttgtcctcaatgccaggctgtgcagtagtcgaggccgag
attgatggtgtgctccacgagtacagcgccatcgaaggtgtacaggaagacgtaattgaa
atcctgttgaaccttaaaggtctggctatcaagctgcacggccgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgccaacctggcgtctaacggcgccttgaac
atgaagctcaccgtagctcgtggtcgtggttatgaaccagcagactcgcgtcagagcgat
gaagatgaaagccgcagcattggtcgcttgcagcttgactcttcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgagcagcgtactaacctggacaagctg
gttattgatctggagaccaacggtacactggatcctgaagaggctattcgtcgtgctgca
accatcctgcaacagcagttggctgcattcgtcgacctcaaaggtgacagcgaaccagtg
gttatcgaacaggaagacgagatcgatccgatcctgcttcgtccggttgacgatctggaa
ctgaccgtgcgttcggccaactgccttaaggcggagaacatttactacatcggtgacctg
attcagcgcaccgaagtagaactgttgaagactccgaacctgggcaagaaatccttgact
gaaatcaaggacgttctggcctcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaggacgacaaggcgactgcctga
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