Pseudomonas putida S16: PPS_0010
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Entry
PPS_0010 CDS
T01570
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03030
DNA replication
ppt03430
Mismatch repair
ppt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PPS_0010
03430 Mismatch repair
PPS_0010
03440 Homologous recombination
PPS_0010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppt03032
]
PPS_0010
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_0010
Enzymes [BR:
ppt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PPS_0010
DNA replication proteins [BR:
ppt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PPS_0010
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PPS_0010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AEJ10599
UniProt:
F8FT01
LinkDB
All DBs
Position
11057..12160
Genome browser
AA seq
367 aa
AA seq
DB search
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE
EPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCNLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSRNTLRAVSTDGHRLALC
SMSAPIEQDDRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVVGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ
EEAEEEISVDYEGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgccggtgtc
gtcgagcgccgtcagaccttgccggtcctgtccaacgtattgctggtcgtgcaaggccag
caactgtcgttgaccggtaccgacctggaagtcgaactggtaggccgcgtgcaactggaa
gagccggccgagcctggcgaaatcactgtcccggcccgcaagctgatggacatttgcaaa
agcctgccgaacgacgccctgatcgatatcaaggtcgacgagcagaaactgttggtcaag
gccggccgtagccgctttaccctgtcgaccctgccagccaatgacttcccgaccgtggaa
gaaggcccgggctcgctgacctgcaatctggaacagagcaagctgcgccgcctgatcgag
cgcaccagtttcgccatggcccagcaggatgtgcgctactacctcaacggcatgctgctg
gaggtttcccgcaacaccctgcgagctgtgtccactgacggtcaccgcctggcgctgtgc
tccatgagcgcaccgatcgagcaggatgatcgccaccaggtcatcgtgccacgcaaaggt
atcctcgaactggcacgcctgctgaccgatccggaaggcatggtcagcatcgtcctgggc
cagcaccacatccgtgctacaaccggtgagttcacctttacttccaagctggtggacggc
aagttcccggactacgagcgcgtactgcccaagggcggtgacaagctggtggtcggcgac
cgtcaggcgctgcgtgaagccttcagccgtactgcgattctttccaacgaaaagtaccgc
ggtatccgcctgcaactggctgctggccaactgaagatccaggccaacaaccccgagcag
gaagaagctgaagaagaaatcagcgtggactacgaaggtagctcgctagaaatcggtttc
aacgtcagctacctgctggacgtgctgggcgtaatgactaccgagcaagttcgtctgatc
ctgtccgattccaacagcagtgccctgctgcaggaagctggcaatgacgattcttcctac
gttgtcatgccaatgcgtctgtaa
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