Pseudomonas putida S16: PPS_0754
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Entry
PPS_0754 CDS
T01570
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PPS_0754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppt03400
]
PPS_0754
DNA repair and recombination proteins [BR:
ppt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PPS_0754
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PPS_0754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_21
AAA_16
RsgA_GTPase
DUF4350
MCR
Motif
Other DBs
NCBI-ProteinID:
AEJ11335
UniProt:
F8FT37
LinkDB
All DBs
Position
858005..860602
Genome browser
AA seq
865 aa
AA seq
DB search
MQVRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTIYAEAQRRYFESVAPYARR
LIDQAGVPDVDAIDGLPPAVALQQQRGASNARSSVGSVTTLSSLVRMMYSRAGAYPANQP
MLYAEDFSPNTPQGACSTCHGLGHVYEVTEAIMVPDPSLSIRERAIASWPPAWQGQNLRD
ILVSMGYDVDRPWKDLPKKDRDWILFTEETPTVPVYAGFTPAETRTALKRKMEPSYMGTF
TGARRYVLHTFANTQSALMRKRVSRFMEGKPCPTCHGKRLKPEALSVTFAGVDIGAFMQM
PLDHLAALLEPIAQGDFRAHAAGAATDKEATRRERAERAATGRAVHAVSPDVRRTSALSE
EKRLAAQRLAGGVMARLRQLRELGLGYLTLDRATPTLSAGELQRLRLATQLSSLLFGVVY
VLDEPSAGLHPSDSQALYDALDRLRDAGNSVFVVEHDLDLMRRAQWLVDVGPDAGERGGR
VLYSGEPDGLRKIAESRTARYLFDEIPAPGSRAREATGWLELQGIHRHNLHGVDARIPLG
VLTAVTGISGSGKSSLVAQALPELVLLHLGHEPEDDVAESATSEGPAVVEATGGHLAGDV
DAIQRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPDARRRRYDAGRFSFNVAKGR
CETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVQWNGRNIAEVLQMTVDDASEF
FAGEDAVARPLQLLRDIGLGYLRLGQPATELSGGEAQRIKLATELQRSQRGRSLYVLDEP
TTGLHASDADRLLVQLQRLVDAGNTVVMIEHDMRAVAQADWVIDVGPGAGAAGGSIVVAG
SPQQVARKSGSRTAPFLARELARAE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgcgtggcgcgcgtgagaacaacctcaaagaggtggacgtctctatcccgcgg
aatgcgctggtggtgttctcgggtgtctccggctccgggaagtcctcgctggccttcggc
accatctatgccgaggcgcagcgacgctactttgagtcggtggccccctatgcacggcgc
ctgatcgaccaggcgggcgtgccggacgtagatgcgatcgacggcctgccaccagcggtg
gcgctgcagcagcagcggggggccagcaatgcgcgttcctccgtgggcagtgtgaccacc
ctgtccagcctggtgcggatgatgtattcgcgcgccggcgcctatcccgccaaccagccg
atgctgtacgccgaggatttttcgccgaacacgccgcagggggcgtgctcgacctgccac
ggcttgggtcatgtgtacgaagtgaccgaggcgatcatggtgcccgacccctccctgagc
atccgtgagcgggcgattgcttcctggccacccgcctggcagggccagaacctgcgcgac
atcctggtcagcatgggctacgacgttgaccggccgtggaaggacctgccgaaaaaggat
cgcgactggattctgttcaccgaggaaacaccaacggtgccggtgtacgccggtttcacg
cctgccgaaacccgcaccgcgctcaaacgcaagatggagccgagctacatgggcaccttc
accggcgcccggcggtatgtgttgcacaccttcgccaatacccagagcgcgctgatgaga
aagcgcgtatcccggttcatggagggcaagccgtgccccacctgccacggcaagaggctc
aagcccgaagcgctgtcggtcaccttcgctggggtggacatcggcgcgtttatgcagatg
ccgctggaccacttggcggcattgctcgaacccatcgcacagggcgatttccgcgcccat
gcagcgggtgcggctacggacaaggaagcgacccggcgcgagcgtgccgaacgcgctgcc
accggccgtgcggtccatgcggtatcgcccgacgtgcgccgtacctccgcgctgtcggaa
gaaaagcgcctcgccgcacagcgcctggctggaggcgtgatggcgcgcctgcgccaactg
cgcgagctaggcctgggctacctgacgctggaccgggccacgccgacgctttcggccggc
gagttgcaacgcttgcggttggccacgcaattaagttccctgctgttcggcgtcgtgtac
gtacttgacgaaccctcggcgggcctgcatccctccgacagccaggccctgtacgatgca
ctcgaccggctgcgcgacgcgggcaactcggtgtttgtggtggagcacgacctggacctg
atgcgccgcgcgcaatggctcgtggatgtcgggccggatgccggcgagcgtggcggccgc
gtgctctacagcggcgagccggatggcctgcgcaagattgccgaatcgcgtactgcacgt
tacctgttcgacgaaattcccgcacccggaagccgagcacgcgaagcgaccggctggttg
gagctgcagggcatccaccgccataacctgcatggcgtggatgcgcgcattccgctgggc
gtgctgacagccgttaccggcatctctggctccggcaaatccagcctcgtcgcgcaggcc
ctgccggaattggtgctgctgcacctgggccacgagcctgaagacgatgtcgccgaaagc
gccaccagcgaagggccggcagtggtcgaagcgaccggcggccatctggcgggcgacgtg
gacgccatacagcgcctggtgcaggtggaccagaagccgatcgggcgcacgccgcggtcg
aacctggctacctacacgggtctgttcgaccatgtgcgcaagctgttcgccgccacgccc
gatgctcgacgccgccgctatgatgccggacggttctcgttcaacgtcgccaaggggcgc
tgcgagacttgcgagggcgagggtttcgttagcgtggaactgctgttcatgcccagcgtg
tacgcgccgtgcccgacctgccatggcgcgcgctacaacgaggccacgctgaaggtgcag
tggaacgggcgcaacatcgccgaggtgctgcagatgaccgtggacgatgccagcgaattc
ttcgcgggtgaagacgcggtggcaaggcccctgcaactgctgcgcgacatcggactgggc
tatctgcgcctggggcaaccggccactgagctttccggtggcgaggcgcagcgcatcaag
ctggcgaccgagcttcagcgcagccagcgcggccgaagcctgtacgtgctcgacgagccg
accaccgggctgcacgcgtcggatgccgaccggctgctggtgcagttgcagcgcctggtc
gatgccggcaataccgtagtgatgatcgagcacgacatgcgtgcggtggcccaagccgac
tgggtgattgacgtagggccaggcgcgggcgctgccggcggcagcatcgtggtggcgggt
tcccctcagcaggtggcccgaaagtctggcagccgaaccgctccgttccttgcacgggag
ttggcgcgggccgagtag
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