Pseudomonas putida S16: PPS_4994
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Entry
PPS_4994 CDS
T01570
Name
(GenBank) dinucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ppt
Pseudomonas putida S16
Pathway
ppt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PPS_4994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppt03019
]
PPS_4994
Messenger RNA biogenesis [BR:
ppt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PPS_4994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AEJ15521
UniProt:
F8FY17
LinkDB
All DBs
Position
complement(5669803..5670282)
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcgacggatcaaccaggatgcctggcagtttccccagggtggcatc
aaccctgacgagacgccggaagatgccctgtaccgcgagctgaacgaagaagttggcctt
gaacgcgatgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgactggtgcgtacgcatagccagccgctgtgcatcggccagaagcagaaatggttc
ctgctgcgtctggtcagcaacgaacaacgggtgcggatggacctgaccggcaagccggaa
ttcgacggctggcgttgggtcagctattggtacccgctgggccaggttgtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagcaccgcgtctgctgacgcgcgactga
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