Pseudomonas putida KT2440: PP_2088
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Entry
PP_2088 CDS
T00114
Name
(GenBank) RNA polymerase sigma factor SigX
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppu03021
]
PP_2088
Transcription machinery [BR:
ppu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP_2088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AAN67702
UniProt:
Q88L47
LinkDB
All DBs
Position
2379635..2380225
Genome browser
AA seq
196 aa
AA seq
DB search
MNKVHSPPMRYDPRELTDEELVARSHEELYHVTRAYEELMRRYQRTLFNVCARYLGNDRD
ADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYNECITQYRKERRKRRLMDALSLDPVE
EASEDKAPKPEEKGGLDKWLVHVNPIDREILVLRFVAELEFQEIADIMHMGLSATKMRYK
RALDKLREKFAGLDET
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaagttcattcgccgcccatgcgctatgacccccgcgagctcacagacgaagag
ttggtggcgcgttcgcatgaggagctgtaccacgttacccgcgcctatgaagagctcatg
cggcgctaccaacggaccctgttcaacgtctgtgcgcgttatctggggaacgaccgtgac
gcggacgatgtctgtcaggaagtgatgctgaaagtgctgtacgggctgaagaacttcgag
ggtaagtcgaagttcaagacctggctctacagcatcacctacaacgagtgcattacccag
taccgcaaggagcgtcgcaaacgtcggttgatggatgccttgagtctggaccctgttgaa
gaggcgtccgaagacaaggctccgaagccggaagaaaaaggcgggctggacaagtggctg
gtgcatgtgaacccgattgaccgggaaattctggtgctgcgttttgtcgcagagctggag
ttccaggaaattgccgacatcatgcacatgggcctgagcgcgacgaaaatgcgttacaag
cgcgcgctagacaagcttcgggagaaatttgccggccttgatgaaacttag
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