Pseudomonas putida KT2440: PP_4142
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Entry
PP_4142 CDS
T00114
Symbol
rnhA
Name
(GenBank) ribonuclease H
KO
K03469
ribonuclease HI [EC:
3.1.26.4
]
Organism
ppu
Pseudomonas putida KT2440
Pathway
ppu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP_4142 (rnhA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppu03032
]
PP_4142 (rnhA)
Enzymes [BR:
ppu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PP_4142 (rnhA)
DNA replication proteins [BR:
ppu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RNase H
PP_4142 (rnhA)
Prokaryotic type
Elongation factors (bacterial)
RNase H
PP_4142 (rnhA)
Elongation factors (archaeal)
PP_4142 (rnhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
TAF
Motif
Other DBs
NCBI-ProteinID:
AAN69724
UniProt:
Q88FF5
LinkDB
All DBs
Position
complement(4679510..4679956)
Genome browser
AA seq
148 aa
AA seq
DB search
MSDSVEMFTDGACKGNPGPGGWGVLMIYKGVEKELWGGERETTNNRMELMAAIQGLMSLK
RECEVVLTTDSQYVMKGINEWMVNWKKRGWKTAAKEPVKNADLWQQLDEQVNRHKVTWKW
VRGHIGHPGNERADQLANRGVDEVRAQR
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagcgtcgagatgtttactgatggtgcctgcaagggcaaccctggcccgggt
ggctggggcgtgctgatgatctacaagggcgtcgagaaggaactgtggggcggcgaacgt
gagaccaccaacaaccgcatggagctgatggctgcgatccagggcctgatgtcgctcaag
cgtgaatgcgaggtggtgctgaccaccgactcgcagtacgtgatgaagggcatcaacgaa
tggatggtcaactggaagaagcgtggctggaagaccgccgccaaggagccggtgaagaac
gctgacttgtggcagcagctcgatgagcaggtcaaccgccacaaggtaacctggaagtgg
gtgcgcggccatattggccaccccggcaacgaacgcgccgaccagctggccaaccgtggg
gtcgatgaggtgcgcgcccagcgttga
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