Pseudomonas putida KT2440: PP_4902
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Entry
PP_4902 CDS
T00114
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ppu
Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:
ppu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppu03019
]
PP_4902 (orn)
03009 Ribosome biogenesis [BR:
ppu03009
]
PP_4902 (orn)
Messenger RNA biogenesis [BR:
ppu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PP_4902 (orn)
Ribosome biogenesis [BR:
ppu03009
]
Eukaryotic type
Pre-60S particles
RNases
PP_4902 (orn)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AAN70469
UniProt:
Q88DC5
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All DBs
Position
complement(5572222..5572764)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgacgtcatcatcgaaatggccaccatcgtcaccgacagcgagctcaataccttggcc
gaagggccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgagtgg
aacacccgcacccatggtgcttcggggctgacccagcgcgtacgcgagagcaaggtcagc
atggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctaccgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctccaccctcaaggaactggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaatacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgtcactatcgcgagcacttcatcaagctg
tga
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