KEGG   Pseudomonas putida KT2440: PP_4902
Entry
PP_4902           CDS       T00114                                 
Symbol
orn
Name
(GenBank) Oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ppu  Pseudomonas putida KT2440
Brite
KEGG Orthology (KO) [BR:ppu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ppu03019]
    PP_4902 (orn)
   03009 Ribosome biogenesis [BR:ppu03009]
    PP_4902 (orn)
Messenger RNA biogenesis [BR:ppu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PP_4902 (orn)
Ribosome biogenesis [BR:ppu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PP_4902 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: AAN70469
UniProt: Q88DC5
LinkDB
Position
complement(5572222..5572764)
AA seq 180 aa
MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
NLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggcctggatccggac
agcgacgtcatcatcgaaatggccaccatcgtcaccgacagcgagctcaataccttggcc
gaagggccggtgatcgccatccaccacagtgacgaagtgctggcgcgcatggacgagtgg
aacacccgcacccatggtgcttcggggctgacccagcgcgtacgcgagagcaaggtcagc
atggccgaagccgaggcacagaccatcgccttcctcgagcagtgggtgcctaaaggcaag
tcgccgatctgcggcaacagcatctgccaggatcgtcgtttcctctaccgccacatgcgc
aacctggaaaactacttccactaccgcaacctggatgtctccaccctcaaggaactggcc
gcgcgctgggcgccggacgtgcgtgacagcttcaagaagggcaatacccacctggcgctg
gacgatatccgcgaatcgatcgccgaactgcgtcactatcgcgagcacttcatcaagctg
tga

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