Pseudomonas putida DLL-E4: DW66_0024
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Entry
DW66_0024 CDS
T03439
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ppud
Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppud03032
]
DW66_0024
03400 DNA repair and recombination proteins [BR:
ppud03400
]
DW66_0024
Enzymes [BR:
ppud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DW66_0024
DNA replication proteins [BR:
ppud03032
]
Prokaryotic type
DNA Topoisomerases
DW66_0024
DNA repair and recombination proteins [BR:
ppud03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DW66_0024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHZ74551
UniProt:
A0A059UPT0
LinkDB
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Position
25617..28037
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AA seq
806 aa
AA seq
DB search
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ
VFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIE
QEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLS
RLYPEELTEHFIYLPEVSLEQLGDHAVMQAWLAQFQERLNNSQKSGLVYKASLREDKERN
VWLPEVEVTSHGLASYVTFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVE
FKEGLDWLMNETTKRHTIQRYKGLGEMNPEQLWETTMDPTVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALSVSNLDF
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaatcaaacgtacgactcctccagcatcaaggtgctgaaaggtttggatgcc
gtgcgcaagcgccccggcatgtacattggcgacaccgatgatggtagcggcctgcaccac
atggtcttcgaggtggtcgacaactcgatcgacgaagccctcgccggtcactgcgatgac
atcaccgtcatcatccacccggacgaatccatcagtgtgcgcgacaacggtcgcggcatt
ccggtcgacgtgcataaagaagaaggcgtttccgcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctacaaggtatccggcggtctgcacggcgta
ggtgtttctgttgtgaacgccctgtccgagaaactggtactgaccgttcgtcgtagcggc
aagatctgggaacagacctacgttcacggtgttccacaggcgccgatggcggttgtaggt
gacagcgaaaccaccggtacccacatccacttcaagccttcggctgaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgtatccgagagctgtccttcctcaactcg
ggcgttggcatcctgctaaaggatgaacgtagcggtaaggaagagttcttcaagtacgaa
ggcggcctgcgtgcgttcgtcgaatacctgaacaccaacaagaccccggtcaactcccag
gtattccacttcaacgtccagcgtgacgatggcgtgggtgttgaagttgccctgcagtgg
aatgacagcttcaacgaaaacctgttgtgcttcaccaacaacattccgcagcgtgatggc
ggtactcacttggtgggcttccgttcctcgctgacccgtagcctgaacagctacatcgaa
caggaaggcctggccaagaagaacaaggtggcgaccactggcgacgacgcccgtgaaggc
ctgaccgcgatcatctcggtgaaggtgccggaccctaagttcagctcgcagaccaaggac
aagctggtctcctcggaggtgaaaaccgccgtggaacaggagatgaacaagtacttcgcc
gacttcctgctggaaaacccgaacgaggccaaggccgtcgttggcaagatgattgacgct
gcccgtgcccgtgaagcggcacgtaaagcccgtgaaatgactcgccgtaaaggcgcgctg
gatattgccggcctgccaggcaaactggcggactgccaggaaaaggaccctgccctttcc
gaactgtacctggtggagggtgactccgcgggtggctcggcgaagcaaggccgcaaccgt
cgtacccaggcaatcctgccgttgaagggtaaaatcctcaacgtcgagaaagcgcgcttc
gacaagatgatctcgtcccaggaagttggcacgctgatcactgcactgggctgtggtatc
ggtcgcgaagagtacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgat
gctgacgttgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagctg
ccggagctggtcgagcgcggctacatctacattgcccagccaccgctgtacaaggtgaag
aaaggcaagcaggagcagtacatcaaggacgacgaggccatggaagagtacatgacccag
tcggccctggaagatgccagcctgcatctggacgagtcggcaccagcggtttccggtgta
cagctggaagcattggtgaatgaattccgtagtgtcatgaagacactcaagcgtctgtcg
cgcttgtacccggaagagctgaccgagcacttcatctacctgccggaagtcagcctggaa
cagctgggtgaccatgctgtgatgcaagcctggctggcccagttccaggagcgcctgaac
aacagccagaagtccggcctggtttacaaagccagcctgcgcgaagacaaagagcgcaac
gtatggttgccagaagtggaagttacctcccacggcctggccagctacgtgactttcaac
cgggacttcttcggcagcaatgactaccgtaccgtagtcaacattggtgccaagctgtcc
agcttgttgggcgaaggtgcttatgtgcagcgaggtgagcgccgcaaggcaattgtcgag
ttcaaggaaggcctggattggctgatgaacgaaaccaccaagcgccacaccatccagcga
tacaaagggctgggcgagatgaaccctgagcagctgtgggaaaccaccatggacccgacc
gtccgccgtatgctcaaggtcaccatcgaggatgcgatcgctgccgaccagatcttcaac
accctgatgggtgatgcggtcgagccgcgtcgtgacttcatcgaaagcaacgcgctgtcg
gtatcgaacctggacttctga
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