KEGG   Pseudomonas putida DLL-E4: DW66_0024
Entry
DW66_0024         CDS       T03439                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ppud  Pseudomonas putida DLL-E4
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppud03032]
    DW66_0024
   03400 DNA repair and recombination proteins [BR:ppud03400]
    DW66_0024
Enzymes [BR:ppud01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     DW66_0024
DNA replication proteins [BR:ppud03032]
 Prokaryotic type
  DNA Topoisomerases
   DW66_0024
DNA repair and recombination proteins [BR:ppud03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DW66_0024
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: AHZ74551
UniProt: A0A059UPT0
LinkDB
Position
25617..28037
AA seq 806 aa
MSENQTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDD
ITVIIHPDESISVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSEKLVLTVRRSGKIWEQTYVHGVPQAPMAVVGDSETTGTHIHFKPSAETFKN
IHFSWDILAKRIRELSFLNSGVGILLKDERSGKEEFFKYEGGLRAFVEYLNTNKTPVNSQ
VFHFNVQRDDGVGVEVALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSSLTRSLNSYIE
QEGLAKKNKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFA
DFLLENPNEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALS
ELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGI
GREEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELVERGYIYIAQPPLYKVK
KGKQEQYIKDDEAMEEYMTQSALEDASLHLDESAPAVSGVQLEALVNEFRSVMKTLKRLS
RLYPEELTEHFIYLPEVSLEQLGDHAVMQAWLAQFQERLNNSQKSGLVYKASLREDKERN
VWLPEVEVTSHGLASYVTFNRDFFGSNDYRTVVNIGAKLSSLLGEGAYVQRGERRKAIVE
FKEGLDWLMNETTKRHTIQRYKGLGEMNPEQLWETTMDPTVRRMLKVTIEDAIAADQIFN
TLMGDAVEPRRDFIESNALSVSNLDF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgagcgaaaatcaaacgtacgactcctccagcatcaaggtgctgaaaggtttggatgcc
gtgcgcaagcgccccggcatgtacattggcgacaccgatgatggtagcggcctgcaccac
atggtcttcgaggtggtcgacaactcgatcgacgaagccctcgccggtcactgcgatgac
atcaccgtcatcatccacccggacgaatccatcagtgtgcgcgacaacggtcgcggcatt
ccggtcgacgtgcataaagaagaaggcgtttccgcagccgaggtcatcatgaccgtgctg
cacgccggcggtaagttcgacgacaactcctacaaggtatccggcggtctgcacggcgta
ggtgtttctgttgtgaacgccctgtccgagaaactggtactgaccgttcgtcgtagcggc
aagatctgggaacagacctacgttcacggtgttccacaggcgccgatggcggttgtaggt
gacagcgaaaccaccggtacccacatccacttcaagccttcggctgaaaccttcaagaac
attcacttcagctgggacatcctggccaagcgtatccgagagctgtccttcctcaactcg
ggcgttggcatcctgctaaaggatgaacgtagcggtaaggaagagttcttcaagtacgaa
ggcggcctgcgtgcgttcgtcgaatacctgaacaccaacaagaccccggtcaactcccag
gtattccacttcaacgtccagcgtgacgatggcgtgggtgttgaagttgccctgcagtgg
aatgacagcttcaacgaaaacctgttgtgcttcaccaacaacattccgcagcgtgatggc
ggtactcacttggtgggcttccgttcctcgctgacccgtagcctgaacagctacatcgaa
caggaaggcctggccaagaagaacaaggtggcgaccactggcgacgacgcccgtgaaggc
ctgaccgcgatcatctcggtgaaggtgccggaccctaagttcagctcgcagaccaaggac
aagctggtctcctcggaggtgaaaaccgccgtggaacaggagatgaacaagtacttcgcc
gacttcctgctggaaaacccgaacgaggccaaggccgtcgttggcaagatgattgacgct
gcccgtgcccgtgaagcggcacgtaaagcccgtgaaatgactcgccgtaaaggcgcgctg
gatattgccggcctgccaggcaaactggcggactgccaggaaaaggaccctgccctttcc
gaactgtacctggtggagggtgactccgcgggtggctcggcgaagcaaggccgcaaccgt
cgtacccaggcaatcctgccgttgaagggtaaaatcctcaacgtcgagaaagcgcgcttc
gacaagatgatctcgtcccaggaagttggcacgctgatcactgcactgggctgtggtatc
ggtcgcgaagagtacaacatcgacaagctgcgttatcacaacatcatcatcatgaccgat
gctgacgttgacggttcgcacatccgtaccctgctgctgaccttcttcttccgtcagctg
ccggagctggtcgagcgcggctacatctacattgcccagccaccgctgtacaaggtgaag
aaaggcaagcaggagcagtacatcaaggacgacgaggccatggaagagtacatgacccag
tcggccctggaagatgccagcctgcatctggacgagtcggcaccagcggtttccggtgta
cagctggaagcattggtgaatgaattccgtagtgtcatgaagacactcaagcgtctgtcg
cgcttgtacccggaagagctgaccgagcacttcatctacctgccggaagtcagcctggaa
cagctgggtgaccatgctgtgatgcaagcctggctggcccagttccaggagcgcctgaac
aacagccagaagtccggcctggtttacaaagccagcctgcgcgaagacaaagagcgcaac
gtatggttgccagaagtggaagttacctcccacggcctggccagctacgtgactttcaac
cgggacttcttcggcagcaatgactaccgtaccgtagtcaacattggtgccaagctgtcc
agcttgttgggcgaaggtgcttatgtgcagcgaggtgagcgccgcaaggcaattgtcgag
ttcaaggaaggcctggattggctgatgaacgaaaccaccaagcgccacaccatccagcga
tacaaagggctgggcgagatgaaccctgagcagctgtgggaaaccaccatggacccgacc
gtccgccgtatgctcaaggtcaccatcgaggatgcgatcgctgccgaccagatcttcaac
accctgatgggtgatgcggtcgagccgcgtcgtgacttcatcgaaagcaacgcgctgtcg
gtatcgaacctggacttctga

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