Pseudomonas putida DLL-E4: DW66_3289
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Entry
DW66_3289 CDS
T03439
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppud
Pseudomonas putida DLL-E4
Pathway
ppud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DW66_3289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppud03400
]
DW66_3289
Enzymes [BR:
ppud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DW66_3289
DNA repair and recombination proteins [BR:
ppud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DW66_3289
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AHZ77797
UniProt:
A0A059UXQ6
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All DBs
Position
3589033..3589845
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AA seq
270 aa
AA seq
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MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK
GHYGVALLSRQAPLSLHKGFASDEEDAQRRFIWGTFADADGNPITIMNGYFPQGESRDHP
TKFPAKQRFYSDLQALLEGQFRNDQPLLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF
LPEEREWMERLKGWGLVDSFRHLYPEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQHL
VPRIKDAGVDYELRGMEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtctgtttcaacatcaacggcctgcgggcccgcccgcaccagctggcggcg
ctgatcgaaaagcaccagccggacgtgatcggcctgcaggaaaccaaggtcagcgacgat
cagttcccgctggccgacgtgcaggcgctgggctaccacgtgcattaccacggccagaaa
ggccactatggcgtggccctgctgtcccgccaggcaccgctgagcctgcacaagggtttt
gccagcgatgaggaagacgctcagcgccgcttcatctggggcaccttcgccgatgccgat
ggcaacccgatcaccatcatgaacggctatttccctcagggtgaaagccgcgaccacccc
accaagttcccggccaagcagcgcttctacagcgacctgcaggcgctgctggagggccag
ttccgcaacgaccagccactgctggtgatgggcgacatgaatatctcgccgcaggactgc
gacatcggcatcggcccggacaatgccaagcgctggctcaagactggcaagtgcagtttc
ctgccggaagagcgcgagtggatggaacgcttgaagggctggggcctggtggacagtttc
cgccacctttacccggaagtggccgaccgcttcagctggttcgactaccgcagccgcggt
ttcgaggacgagcccaagcgcggcctgcgcatcgacctgatcatggcctcccagcacctg
gtgccgcggatcaaggatgcaggtgtggactacgaactgcgcgggatggaaaagccgtcg
gaccatgcgccgatctggctggaattgagctga
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