KEGG   Pseudomonas putida DLL-E4: DW66_4905
Entry
DW66_4905         CDS       T03439                                 
Name
(GenBank) exodeoxyribonuclease V subunit alpha
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ppud  Pseudomonas putida DLL-E4
Pathway
ppud03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DW66_4905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppud03400]
    DW66_4905
Enzymes [BR:ppud01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DW66_4905
DNA repair and recombination proteins [BR:ppud03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DW66_4905
SSDB
Motif
Pfam: AAA_19 AAA_30 RecD_N AAA_11 UvrD_C_2 Helicase_RecD AAA_22 Viral_helicase1 SH3_13 UvrD-helicase AAA_16 SLFN-g3_helicase AAA_28 AAA_17 nSTAND3 T2SSE NTPase_1 AAA_5 PhoH NACHT
Other DBs
NCBI-ProteinID: AHZ79403
UniProt: A0A059V5G6
LinkDB
Position
complement(5383053..5385128)
AA seq 691 aa
MSRSLVDLLPTPLHAEHLLALAPQHDSGDLLQLLDRWVERGWLRALDRAFVSFLEELAPG
SDPLLLLAAALASHQLGHGHVCLDLQQTLAEPDFALSLPPEGDALTGPLLLPSQLLADLD
LHAWRQRIAASPLVAAGDTSGQQARPLVLSGERLYLRRYWSYERRIDHTLRQRLTQSEAP
PADLRGRLAQLFDGGTPAGQVDWQKLACALATRAGFSIITGGPGTGKTTTVVRLLALLQA
PAVEQGRPLRIRLAAPTGKAAARLTESIGQQVERLQVSAEVRGQIPTEVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLDALPPRARLVLLGDKDQLASVEAGA
VLGDLCRDAEEGCYSSATEAWLEQIGGESLAGSGLKAGDEQRNPLAQQVVMLRFSRRFGE
GSGIGQLARLVNRQDSHAARNLLATPPPDVHSLALKHEQDRAFDRLLLDGLNRGSDGPQG
YRSYLRTLGRFRPALDTAVDDPAWEQWAGKVLHSFEDFQLLCAVRRGAWGVEGLNERVAR
VLHNAGLIDSQQPWYEGRPVLVTRNDYGLGLMNGDIGIALRLPDERGEPLLRVAFPRNDG
SGGVRFVLPSRLNEVETVFAMTVHKSQGSEFSHTALVLPDALNPVLTKELVYTGITRAKH
CFSLVEPRQGIFEEAVARKVRRISGLMLEQV
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgagccgaagcctagtcgacctgttgcccaccccgctgcacgccgagcacctgcttgca
ttggcgccacagcatgacagcggtgacctgctgcaactgctcgaccgctgggtagagcgc
ggctggctgcgtgccctggaccgagcgttcgtatcattcctggaggagctagcccccggt
agtgacccactgctgttgctggccgccgccctggccagccaccaactgggccacggccat
gtctgcctcgacctgcagcagaccctggccgagcccgatttcgccctgtccttgccgcct
gaaggcgacgccttgaccggccccttgctgctgccttcgcagttgctcgccgacctcgac
ctgcacgcctggcgccagcgcattgccgccagtccgctagtggccgccggcgatacttcg
gggcagcaagcgcggcctctggtgctcagcggagagcgcctgtacttgcgccgttactgg
agttacgagcggcgcatcgaccatacacttcgccagcgcctgacccagtccgaagcgccc
ccggccgacttgcgtggccgcctggcgcagctgtttgacggcggtacgccggctggccag
gtggactggcagaagctcgcctgcgcccttgccacccgcgcaggcttcagcatcatcacc
ggcggccccggcacgggcaagacaaccaccgtggtacgccttttggccttgctgcaggcg
ccggcggtggagcagggcaggccattgcgcattcgcctggccgcgccgaccggcaaggcg
gccgcgcgcctgaccgaatccattggccagcaggtcgagcgcctgcaggtcagcgccgag
gtgcgcgggcagatccccaccgaggtcagcaccgtgcaccgcctgctcggcagccgcccc
ggttcgcggcacttccgccaccatgccggcaacccgctgccgttggacgtgctggtggtc
gacgaagcgtcgatgatcgacctggaaatgatggccaacctgctcgatgccctgccgcca
cgggcacgtctggtactgctgggcgacaaggaccagctggcctcggtcgaagccggtgcg
gtactgggtgacctgtgccgggatgccgaggagggctgttactcgtcggcgaccgaggca
tggctggagcagatcggtggcgagtcgctggcgggcagcggcctcaaggccggcgatgag
caacgcaacccgttggcccagcaggtggtgatgctgcgcttctcgcggcgttttggcgaa
ggcagcggcattggccaactggcccggctggtcaatcgccaggactcccacgcggcccgc
aacctgttggccacgccgccgcccgatgtgcatagcctggccctgaagcacgaacaggac
cgcgccttcgaccgcctgctgctcgacgggctgaaccgcggcagcgacggcccgcagggt
tatcgcagctatctgcgcacccttggccgcttccgcccggcactcgataccgccgttgac
gaccccgcctgggagcaatgggcgggcaaggtgctgcacagcttcgaagacttccagctg
ctgtgtgcggtacgccgcggcgcctggggtgtcgaaggcctcaacgagcgggtggcgcgg
gtactgcacaatgccgggctgatcgacagccagcagccctggtacgaagggcgcccggtg
ctggtcacccgcaatgactacggcctgggcctgatgaacggtgacatcggcatcgccctg
cgcctgccggacgagcgcggcgaacccttactgcgcgtggccttcccgcgtaacgacggc
agtgggggcgtgcgcttcgtcctgcccagccggctgaacgaagtggaaacggtattcgcc
atgaccgtgcacaagtcccagggctcggagttcagccacaccgcgctggtgctgccggat
gcgctcaacccggtgctgaccaaggaactggtatacaccggcatcacccgcgccaagcat
tgcttcagcctggtcgagcctcgccagggtattttcgaagaagcggtcgcgcgcaaggta
cggcgtatttccggattgatgctggagcaggtctga

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